Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:86060198..86062615-chr9:33441371..33443462,2	MCF-7	breast:
2	chr8:86060046..86062582-chr8:86088601..86090458,2	MCF-7	breast:
3	chr8:86058766..86061369-chr8:86087811..86090336,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11261476	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11991718	1.00[ASN][1000 genomes]
rs2432069	0.83[EUR][1000 genomes]
rs2432070	0.83[EUR][1000 genomes]
rs2432071	0.83[EUR][1000 genomes]
rs2432075	0.83[EUR][1000 genomes]
rs2432078	0.83[EUR][1000 genomes]
rs2432084	0.83[EUR][1000 genomes]
rs2453870	0.83[EUR][1000 genomes]
rs2466766	0.83[EUR][1000 genomes]
rs2466767	0.83[EUR][1000 genomes]
rs2466772	0.83[EUR][1000 genomes]
rs3736038	1.00[ASN][1000 genomes]
rs4150888	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4150892	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4150899	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4150963	0.83[EUR][1000 genomes]
rs56257706	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58060795	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs61611893	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73688678	1.00[ASN][1000 genomes]
rs73688687	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73688696	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73691803	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73691805	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7823815	1.00[ASN][1000 genomes]
rs7845805	1.00[ASN][1000 genomes]
rs9650671	0.83[EUR][1000 genomes]
rs9650672	0.83[EUR][1000 genomes]
rs9650673	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3481417	chr8:85279453-86145229	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	esv3481418	chr8:85279453-86145229	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:86020400-86062600	Weak transcription	Pancreas	Pancrea
2	chr8:86040600-86062000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr8:86046600-86064800	Weak transcription	Thymus	Thymus
4	chr8:86046600-86065800	Weak transcription	Rectal Mucosa Donor 29	rectum
5	chr8:86049400-86065800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
6	chr8:86050800-86061400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr8:86055000-86062400	Weak transcription	Dnd41	blood
8	chr8:86060000-86062400	Weak transcription	K562	blood
9	chr8:86060200-86061600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr8:86061200-86062200	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr8:86061200-86062400	Enhancers	Brain Anterior Caudate	brain

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