Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:25843047..25844904-chr10:25848062..25851001,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11014597	0.93[ASN][1000 genomes]
rs11014611	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11014619	0.88[EUR][1000 genomes]
rs12770279	0.91[ASN][1000 genomes]
rs12780774	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1335198	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17556478	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17557021	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2152214	0.82[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs34832714	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35018399	0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35488334	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35650576	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4145858	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4604775	0.91[ASN][1000 genomes]
rs4747531	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6482495	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72788296	0.98[ASN][1000 genomes]
rs983089	0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs983090	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3349863	chr10:25614571-25946379	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv550227	chr10:25843019-25865744	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv894972	chr10:25849998-25917909	Enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25847200-25861200	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr10:25850200-25851200	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr10:25850400-25851000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr10:25850400-25851400	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr10:25850600-25851000	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr10:25850600-25851200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr10:25850800-25853400	Weak transcription	HUES6 Cell Line	embryonic stem cell

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