Variant report

No.	Distal block	Cell Line	Cell type
1	chr10:25821157..25824087-chr10:25844116..25846156,2	K562	blood:
2	chr10:25835478..25839771-chr10:25841392..25844555,4	K562	blood:
3	chr10:25836858..25839438-chr10:25841392..25844973,3	K562	blood:
4	chr10:25843047..25844904-chr10:25848062..25851001,2	K562	blood:

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10508698	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11014597	0.89[ASN][1000 genomes]
rs11014611	0.91[ASN][1000 genomes]
rs12251283	0.80[AMR][1000 genomes]
rs12259380	0.82[AMR][1000 genomes]
rs12770280	0.87[AMR][1000 genomes]
rs12780774	0.91[ASN][1000 genomes]
rs1335198	0.93[ASN][1000 genomes]
rs16926123	0.81[EUR][1000 genomes]
rs16926129	0.81[EUR][1000 genomes]
rs17556478	0.91[ASN][1000 genomes]
rs17557021	0.91[ASN][1000 genomes]
rs2152214	0.87[ASN][1000 genomes]
rs34136900	0.85[AMR][1000 genomes]
rs34165831	0.80[AMR][1000 genomes]
rs34178991	0.87[AMR][1000 genomes]
rs34372366	0.87[AMR][1000 genomes]
rs34495386	0.82[AMR][1000 genomes]
rs34832714	0.91[ASN][1000 genomes]
rs35018399	0.93[ASN][1000 genomes]
rs35387923	0.82[AMR][1000 genomes]
rs35488334	0.93[ASN][1000 genomes]
rs35650576	0.89[ASN][1000 genomes]
rs4145858	0.93[ASN][1000 genomes]
rs4604775	0.86[ASN][1000 genomes]
rs61400980	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6482495	0.91[ASN][1000 genomes]
rs67192203	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs71495470	0.87[AMR][1000 genomes]
rs72788296	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs72790307	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72796333	0.82[AMR][1000 genomes]
rs9645526	0.91[ASN][1000 genomes]
rs983089	0.89[ASN][1000 genomes]
rs983090	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3349863	chr10:25614571-25946379	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv550227	chr10:25843019-25865744	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25836800-25844800	Weak transcription	NH-A	brain
2	chr10:25843000-25847200	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr10:25843600-25846400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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