Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:25782933..25784846-chr10:25796060..25798061,2	K562	blood:
2	chr10:25758095..25760842-chr10:25796322..25798852,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10508698	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11014579	0.90[EUR][1000 genomes]
rs11014588	1.00[ASN][1000 genomes]
rs11014592	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11014593	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11591807	0.84[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs12770279	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12770280	0.83[AMR][1000 genomes]
rs1329248	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1855674	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34136900	0.81[AMR][1000 genomes]
rs34178991	0.83[AMR][1000 genomes]
rs34229386	0.84[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs34372366	0.83[AMR][1000 genomes]
rs35075874	0.97[ASN][1000 genomes]
rs4316420	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61400980	0.83[AMR][1000 genomes]
rs7090929	0.98[EUR][1000 genomes]
rs7093822	0.91[ASN][1000 genomes]
rs71495470	0.83[AMR][1000 genomes]
rs72788296	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72790307	0.83[AMR][1000 genomes]
rs72796333	0.81[EUR][1000 genomes]
rs7902586	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3349863	chr10:25614571-25946379	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25791600-25800400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr10:25792800-25811600	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr10:25796600-25798000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr10:25796800-25798000	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr10:25796800-25798400	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr10:25797000-25798000	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr10:25797000-25798600	Enhancers	Placenta Amnion	Placenta Amnion
8	chr10:25797200-25798000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr10:25797200-25798000	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr10:25797200-25798000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
11	chr10:25797200-25798000	Enhancers	K562	blood
12	chr10:25797200-25798200	Enhancers	H1 Cell Line	embryonic stem cell
13	chr10:25797200-25798200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr10:25797200-25798200	Enhancers	iPS-20b Cell Line	embryonic stem cell
15	chr10:25797200-25798400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr10:25797400-25798000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr10:25797400-25798000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
18	chr10:25797400-25798400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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