The 2.0 version of rSNPBase

Variant report

Variant rs9650194
Chromosome Location chr8:59871576-59871577
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:59851400-59878600 Weak transcription Aorta Aorta
2 chr8:59852000-59875200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr8:59852000-59883400 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr8:59852200-59871800 Weak transcription Stomach Smooth Muscle stomach
5 chr8:59852200-59874200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr8:59852400-59875000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr8:59852400-59875600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr8:59852600-59888600 Weak transcription Primary hematopoietic stem cells blood
9 chr8:59858200-59872600 Weak transcription Fetal Kidney kidney
10 chr8:59865400-59871800 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr8:59867200-59878600 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr8:59867400-59872000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr8:59868000-59872000 Weak transcription Small Intestine intestine
14 chr8:59868000-59875200 Weak transcription Thymus Thymus
15 chr8:59868000-59880000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr8:59868200-59881200 Weak transcription Primary T cells from cord blood blood
17 chr8:59869200-59872800 Strong transcription Fetal Thymus thymus
18 chr8:59869400-59871600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr8:59869400-59871600 Strong transcription Dnd41 blood
20 chr8:59869400-59871800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr8:59869400-59872400 Enhancers Fetal Brain Male brain
22 chr8:59869400-59874000 Enhancers NHDF-Ad bronchial
23 chr8:59869600-59871800 Enhancers NHLF lung
24 chr8:59869800-59873800 Enhancers Fetal Lung lung
25 chr8:59869800-59876800 Weak transcription Gastric stomach
26 chr8:59870000-59871600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr8:59870200-59871800 Weak transcription Colon Smooth Muscle Colon
28 chr8:59870200-59886600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr8:59870400-59871600 Enhancers Osteobl bone
30 chr8:59870400-59872000 Weak transcription Duodenum Mucosa Duodenum
31 chr8:59870400-59873800 Enhancers Brain Germinal Matrix brain
32 chr8:59870600-59872600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr8:59870800-59871800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr8:59870800-59872200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr8:59870800-59872800 Enhancers Fetal Stomach stomach
36 chr8:59871000-59872000 Weak transcription Fetal Brain Female brain
37 chr8:59871000-59872600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
38 chr8:59871200-59871600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr8:59871200-59872400 Enhancers Duodenum Smooth Muscle Duodenum
40 chr8:59871200-59872400 Enhancers Rectal Smooth Muscle rectum
41 chr8:59871200-59872800 Active TSS Pancreatic Islets Pancreatic Islet
42 chr8:59871200-59872800 Enhancers Stomach Mucosa stomach
43 chr8:59871200-59873600 Enhancers iPS-15b Cell Line embryonic stem cell
44 chr8:59871400-59871600 Enhancers Fetal Heart heart
45 chr8:59871400-59871800 Weak transcription Pancreas Pancrea
46 chr8:59871400-59877200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015