Variant report

Variant	rs9672094
Chromosome Location	chr14:32779347-32779348
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs1002822	0.93[ASN][1000 genomes]
rs1002823	0.93[ASN][1000 genomes]
rs10872861	0.93[ASN][1000 genomes]
rs12050391	0.91[ASN][1000 genomes]
rs12878927	0.88[ASN][1000 genomes]
rs12883285	0.89[ASN][1000 genomes]
rs17091622	0.90[ASN][1000 genomes]
rs17091625	0.90[ASN][1000 genomes]
rs17098639	0.83[ASN][1000 genomes]
rs17098672	0.90[ASN][1000 genomes]
rs1957656	0.93[ASN][1000 genomes]
rs34022213	0.85[ASN][1000 genomes]
rs34758894	0.87[ASN][1000 genomes]
rs35479049	0.85[ASN][1000 genomes]
rs35813050	0.93[ASN][1000 genomes]
rs36037602	0.85[ASN][1000 genomes]
rs36110283	0.90[ASN][1000 genomes]
rs9322888	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901594	chr14:32772850-32786268	Weak transcription Flanking Active TSS Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32768000-32780000	Weak transcription	Psoas Muscle	Psoas
2	chr14:32769800-32780800	Weak transcription	Left Ventricle	heart
3	chr14:32777000-32780800	Weak transcription	HMEC	breast
4	chr14:32777000-32788000	Weak transcription	Esophagus	oesophagus
5	chr14:32777400-32780200	Weak transcription	Fetal Heart	heart
6	chr14:32777400-32791400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr14:32777600-32780400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr14:32777600-32780400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr14:32777800-32780600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr14:32777800-32780600	Weak transcription	Hela-S3	cervix
11	chr14:32777800-32780600	Weak transcription	NHEK	skin
12	chr14:32777800-32780800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr14:32778000-32782600	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr14:32778200-32780200	Weak transcription	Liver	Liver
15	chr14:32778400-32780800	Weak transcription	Pancreas	Pancrea
16	chr14:32778400-32780800	Weak transcription	Stomach Mucosa	stomach
17	chr14:32778400-32782600	Weak transcription	Rectal Mucosa Donor 31	rectum

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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