Variant report

Variant	rs12883285
Chromosome Location	chr14:32759479-32759480
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1002822	0.94[ASN][1000 genomes]
rs1002823	0.92[ASN][1000 genomes]
rs10872861	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12050391	0.95[ASN][1000 genomes]
rs12878639	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12878927	0.98[ASN][1000 genomes]
rs17091622	0.98[ASN][1000 genomes]
rs17091625	0.98[ASN][1000 genomes]
rs17098639	0.92[ASN][1000 genomes]
rs17098672	0.98[ASN][1000 genomes]
rs1957656	0.92[ASN][1000 genomes]
rs34022213	0.95[ASN][1000 genomes]
rs34330292	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34758894	0.98[ASN][1000 genomes]
rs34777318	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs34791667	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs35479049	0.92[ASN][1000 genomes]
rs35813050	0.94[ASN][1000 genomes]
rs36037602	0.95[ASN][1000 genomes]
rs36110283	0.98[ASN][1000 genomes]
rs8020579	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9672094	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3527777	chr14:32669175-32761850	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv3527778	chr14:32669175-32761850	Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32754200-32769400	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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