Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:156759129..156762531-chr3:156763684..156766728,3	K562	blood:
2	chr3:156765672..156767739-chr3:156806327..156809096,2	K562	blood:

Variant related genes	Relation type
ENSG00000241135	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12486875	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12487360	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12491538	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12491708	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12497150	1.00[ASN][1000 genomes]
rs12497945	1.00[EUR][1000 genomes]
rs16826990	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16826999	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16827068	0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs16827087	0.98[ASN][1000 genomes]
rs1871969	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28436625	0.94[ASN][1000 genomes]
rs56691909	1.00[ASN][1000 genomes]
rs57202263	0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58069857	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58557481	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60275122	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60826377	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73873777	1.00[ASN][1000 genomes]
rs9846561	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9990369	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3349885	chr3:156685409-156878910	Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	141 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:156766000-156768000	Weak transcription	GM12878-XiMat	blood

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