Variant report

Variant	rs9838165
Chromosome Location	chr3:68566475-68566476
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs13077992	0.96[CEU][hapmap];0.85[EUR][1000 genomes]
rs13094511	0.95[YRI][hapmap]
rs1355526	0.96[CEU][hapmap];0.81[CHB][hapmap];0.95[YRI][hapmap]
rs1510358	1.00[CEU][hapmap];0.83[YRI][hapmap];0.86[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs1511905	0.84[EUR][1000 genomes]
rs1605980	0.92[CEU][hapmap]
rs5005702	0.96[CEU][hapmap];0.84[EUR][1000 genomes]
rs62246068	0.85[EUR][1000 genomes]
rs7653892	0.92[CEU][hapmap];1.00[YRI][hapmap]
rs9814117	0.83[EUR][1000 genomes]
rs9819753	0.81[CEU][hapmap]
rs9846667	0.84[CEU][hapmap];0.81[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1832396	chr3:68478762-68641509	Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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