Variant report

Variant	rs9846667
Chromosome Location	chr3:68565824-68565825
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs12488549	0.83[MEX][hapmap]
rs13077992	0.83[ASW][hapmap];0.80[CEU][hapmap];0.83[MEX][hapmap];0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1355526	0.80[CEU][hapmap]
rs1510358	0.84[CEU][hapmap];0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1605980	0.91[CEU][hapmap];0.94[MEX][hapmap];0.80[TSI][hapmap]
rs17831305	0.94[MEX][hapmap]
rs5005702	0.80[CEU][hapmap]
rs62246068	0.80[EUR][1000 genomes]
rs7622452	1.00[GIH][hapmap]
rs7633887	1.00[GIH][hapmap]
rs7653892	0.83[ASW][hapmap];0.91[CEU][hapmap];0.90[LWK][hapmap];0.94[MEX][hapmap];0.80[TSI][hapmap];0.81[YRI][hapmap]
rs9819753	0.95[CEU][hapmap];1.00[YRI][hapmap]
rs9838165	0.84[CEU][hapmap];0.81[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1832396	chr3:68478762-68641509	Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv876929	chr3:68508137-68565824	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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