The 2.0 version of rSNPBase

Variant report

Variant rs9906028
Chromosome Location chr17:16962811-16962812
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16949000-16966200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr17:16949000-16975200 Weak transcription K562 blood
3 chr17:16950200-16968200 Enhancers Psoas Muscle Psoas
4 chr17:16952600-16996400 Weak transcription Fetal Brain Male brain
5 chr17:16953600-16967600 Genic enhancers Fetal Muscle Trunk muscle
6 chr17:16954800-16981200 Weak transcription H9 Cell Line embryonic stem cell
7 chr17:16955400-16970200 Weak transcription NH-A brain
8 chr17:16955400-16981200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr17:16956400-16972600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr17:16956600-16965600 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr17:16956600-16966200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr17:16956800-16966000 Weak transcription Primary monocytes fromperipheralblood blood
13 chr17:16957200-16964800 Weak transcription Primary T helper cells PMA-I stimulated --
14 chr17:16957200-16965800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr17:16957400-16963200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr17:16957400-16965000 Weak transcription Primary B cells from cord blood blood
17 chr17:16957600-16964000 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr17:16957800-16963800 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr17:16958800-16965200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr17:16959200-16964600 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
21 chr17:16959200-16965400 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr17:16959200-16966800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr17:16959200-16982200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr17:16959400-16972800 Weak transcription HUVEC blood vessel
25 chr17:16959600-16963800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr17:16959600-16966800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr17:16959600-16966800 Enhancers Skeletal Muscle Female skeletal muscle
28 chr17:16959600-16979800 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr17:16959600-16992000 Weak transcription H1 Cell Line embryonic stem cell
30 chr17:16959800-16963200 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr17:16959800-16964400 Strong transcription Fetal Intestine Small intestine
32 chr17:16959800-16966400 Weak transcription Small Intestine intestine
33 chr17:16960000-16963000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr17:16960000-16963000 Strong transcription Primary T helper cells fromperipheralblood blood
35 chr17:16960200-16963200 Weak transcription Brain Cingulate Gyrus brain
36 chr17:16960200-16963800 Strong transcription Primary T regulatory cells fromperipheralblood blood
37 chr17:16960200-16964400 Strong transcription Fetal Intestine Large intestine
38 chr17:16960200-16965000 Strong transcription Primary T cells fromperipheralblood blood
39 chr17:16960200-16966000 Strong transcription Thymus Thymus
40 chr17:16960200-16967600 Genic enhancers Fetal Muscle Leg muscle
41 chr17:16960400-16963400 Weak transcription Liver Liver
42 chr17:16960400-16963400 Strong transcription Osteobl bone
43 chr17:16960400-16963600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr17:16960400-16963600 Weak transcription Brain Angular Gyrus brain
45 chr17:16960400-16963600 Strong transcription HMEC breast
46 chr17:16960400-16964000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
47 chr17:16960400-16964000 Genic enhancers Lung lung
48 chr17:16960400-16965000 Strong transcription NHEK skin
49 chr17:16960400-16965400 Genic enhancers Breast Myoepithelial Primary Cells Breast
50 chr17:16960400-16966000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015