Variant report
| Variant | rs11551189 |
|---|---|
| Chromosome Location | chr17:17062241-17062242 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr17:17029800-17088400 | Strong transcription | Dnd41 | blood |
| 2 | chr17:17030000-17088000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 3 | chr17:17030400-17079200 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 4 | chr17:17030400-17089200 | Strong transcription | Fetal Intestine Large | intestine |
| 5 | chr17:17031000-17078800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 6 | chr17:17031200-17067800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 7 | chr17:17032000-17073800 | Strong transcription | Fetal Lung | lung |
| 8 | chr17:17032200-17073600 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 9 | chr17:17034800-17072800 | Strong transcription | Placenta Amnion | Placenta Amnion |
| 10 | chr17:17037200-17074200 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr17:17038400-17093800 | Strong transcription | Fetal Brain Female | brain |
| 12 | chr17:17044200-17083600 | Strong transcription | Thymus | Thymus |
| 13 | chr17:17045000-17088400 | Strong transcription | Brain Germinal Matrix | brain |
| 14 | chr17:17045200-17071600 | Strong transcription | Primary B cells from cord blood | blood |
| 15 | chr17:17045200-17075600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 16 | chr17:17045200-17093800 | Strong transcription | Fetal Stomach | stomach |
| 17 | chr17:17045600-17071000 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 18 | chr17:17045600-17072800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 19 | chr17:17045800-17065600 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 20 | chr17:17047600-17066200 | Weak transcription | K562 | blood |
| 21 | chr17:17050400-17073800 | Strong transcription | Fetal Muscle Leg | muscle |
| 22 | chr17:17051000-17093200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 23 | chr17:17053000-17078000 | Strong transcription | Primary B cells from peripheral blood | blood |
| 24 | chr17:17053200-17067200 | Strong transcription | HepG2 | liver |
| 25 | chr17:17053200-17072600 | Strong transcription | Pancreas | Pancrea |
| 26 | chr17:17053200-17074600 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 27 | chr17:17053200-17088200 | Strong transcription | Gastric | stomach |
| 28 | chr17:17053400-17062800 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 29 | chr17:17054600-17064000 | Strong transcription | iPS-15b Cell Line | embryonic stem cell |
| 30 | chr17:17054600-17067000 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 31 | chr17:17054800-17087000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 32 | chr17:17055200-17065600 | Strong transcription | GM12878-XiMat | blood |
| 33 | chr17:17055200-17073000 | Strong transcription | Placenta | Placenta |
| 34 | chr17:17055200-17089400 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 35 | chr17:17055400-17071400 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 36 | chr17:17055400-17072400 | Strong transcription | Ovary | ovary |
| 37 | chr17:17055600-17064000 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 38 | chr17:17055600-17092600 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 39 | chr17:17055800-17064200 | Genic enhancers | Fetal Thymus | thymus |
| 40 | chr17:17055800-17092600 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 41 | chr17:17056000-17093600 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 42 | chr17:17056200-17066600 | Strong transcription | Colon Smooth Muscle | Colon |
| 43 | chr17:17056200-17073200 | Strong transcription | Brain Anterior Caudate | brain |
| 44 | chr17:17056200-17073400 | Strong transcription | Brain Hippocampus Middle | brain |
| 45 | chr17:17056200-17073400 | Strong transcription | Colonic Mucosa | Colon |
| 46 | chr17:17056200-17074200 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 47 | chr17:17056200-17084400 | Strong transcription | Aorta | Aorta |
| 48 | chr17:17056200-17088200 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 49 | chr17:17056200-17092400 | Strong transcription | Stomach Smooth Muscle | stomach |
| 50 | chr17:17056400-17062600 | Weak transcription | Fetal Heart | heart |
