The 2.0 version of rSNPBase

Variant report

Variant rs9907109
Chromosome Location chr17:16987257-16987258
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16952600-16996400 Weak transcription Fetal Brain Male brain
2 chr17:16959600-16992000 Weak transcription H1 Cell Line embryonic stem cell
3 chr17:16973600-16997600 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr17:16974000-16995400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr17:16977200-16991200 Strong transcription Primary B cells from peripheral blood blood
6 chr17:16977400-16992400 Strong transcription Hela-S3 cervix
7 chr17:16978600-16991000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr17:16978800-16996800 Strong transcription Dnd41 blood
9 chr17:16979000-16988600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr17:16979000-16989000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
11 chr17:16979200-16991400 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr17:16979400-16990000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr17:16979400-16991200 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr17:16979400-16991400 Strong transcription Primary T cells from cord blood blood
15 chr17:16979600-16989000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr17:16979600-16989400 Strong transcription Primary T cells fromperipheralblood blood
17 chr17:16979800-16992200 Strong transcription Thymus Thymus
18 chr17:16981600-16991600 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr17:16981600-16995000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr17:16981600-16995400 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr17:16981800-16987600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr17:16981800-16990200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr17:16981800-16990600 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr17:16981800-16992000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr17:16981800-16995400 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr17:16982000-16990600 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr17:16982000-16995400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr17:16982000-16995400 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr17:16982000-16995600 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr17:16982600-16990400 Weak transcription Brain Germinal Matrix brain
31 chr17:16982600-16990600 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr17:16982800-16987400 Weak transcription Fetal Kidney kidney
33 chr17:16982800-16989400 Strong transcription HMEC breast
34 chr17:16982800-16995400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr17:16983000-16996400 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr17:16983400-16995400 Weak transcription H9 Cell Line embryonic stem cell
37 chr17:16983600-16987400 Weak transcription Aorta Aorta
38 chr17:16983800-16989400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr17:16984400-16989800 Weak transcription Psoas Muscle Psoas
40 chr17:16984800-16989400 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr17:16985000-16987600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr17:16985000-16989400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr17:16985000-16989600 Strong transcription A549 lung
44 chr17:16985000-16990200 Weak transcription Fetal Heart heart
45 chr17:16985000-16990400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr17:16985000-16990800 Weak transcription Brain Substantia Nigra brain
47 chr17:16985000-16991800 Weak transcription Colonic Mucosa Colon
48 chr17:16985200-16987600 Weak transcription Brain Angular Gyrus brain
49 chr17:16985200-16987800 Weak transcription Brain Cingulate Gyrus brain
50 chr17:16985200-16988600 Strong transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015