The 2.0 version of rSNPBase

Variant report

Variant rs4321246
Chromosome Location chr17:17025996-17025997
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17006200-17033000 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr17:17010000-17032000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
3 chr17:17011200-17028800 Weak transcription Fetal Brain Female brain
4 chr17:17012000-17035200 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr17:17015400-17035200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr17:17015800-17030000 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr17:17018800-17027200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr17:17019200-17028800 Weak transcription HSMMtube muscle
9 chr17:17019800-17031200 Weak transcription Hela-S3 cervix
10 chr17:17020800-17026200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr17:17020800-17028400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr17:17021400-17028000 Weak transcription Primary hematopoietic stem cells blood
13 chr17:17022600-17028200 Weak transcription Brain Germinal Matrix brain
14 chr17:17022800-17027400 Enhancers Primary T helper 17 cells PMA-I stimulated --
15 chr17:17022800-17028400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr17:17022800-17028600 Enhancers Primary T helper cells fromperipheralblood blood
17 chr17:17022800-17029800 Weak transcription Dnd41 blood
18 chr17:17023000-17028200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr17:17023000-17030200 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr17:17023200-17026200 Weak transcription Primary B cells from cord blood blood
21 chr17:17023200-17034200 Weak transcription NH-A brain
22 chr17:17023400-17028600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr17:17023600-17026000 Weak transcription HSMM muscle
24 chr17:17023600-17028400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr17:17023600-17028600 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr17:17023600-17028800 Weak transcription Aorta Aorta
27 chr17:17023600-17030600 Weak transcription Osteobl bone
28 chr17:17023800-17026000 Weak transcription GM12878-XiMat blood
29 chr17:17023800-17027400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr17:17023800-17028800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr17:17023800-17029800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr17:17024000-17027400 Weak transcription NHEK skin
33 chr17:17024200-17027400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr17:17024200-17043200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr17:17024400-17026000 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr17:17024400-17026200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr17:17024400-17027400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr17:17024400-17027400 Weak transcription Thymus Thymus
39 chr17:17024400-17027600 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr17:17024400-17028400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr17:17024400-17028800 Weak transcription NHDF-Ad bronchial
42 chr17:17024400-17029600 Weak transcription Placenta Amnion Placenta Amnion
43 chr17:17024400-17030200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr17:17024400-17030200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr17:17024400-17030200 Weak transcription HMEC breast
46 chr17:17024400-17032800 Weak transcription HUVEC blood vessel
47 chr17:17024400-17039800 Weak transcription Small Intestine intestine
48 chr17:17024600-17026200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr17:17024600-17027400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr17:17024600-17029000 Weak transcription NHLF lung

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Last update: Aug 31, 2015