The 2.0 version of rSNPBase

Variant report

Variant rs1047805
Chromosome Location chr17:17095644-17095645
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17076600-17104600 Weak transcription K562 blood
2 chr17:17086400-17104800 Weak transcription Brain Substantia Nigra brain
3 chr17:17086400-17106600 Weak transcription Colonic Mucosa Colon
4 chr17:17089600-17096600 Weak transcription Primary monocytes fromperipheralblood blood
5 chr17:17090200-17107000 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr17:17090200-17107400 Weak transcription Small Intestine intestine
7 chr17:17090800-17106600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr17:17090800-17106600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr17:17090800-17107200 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr17:17091200-17104400 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr17:17091400-17104000 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr17:17091800-17107600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr17:17092200-17105400 Weak transcription Gastric stomach
14 chr17:17092400-17104200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr17:17092400-17105600 Weak transcription Brain Germinal Matrix brain
16 chr17:17092800-17096200 Enhancers Colon Smooth Muscle Colon
17 chr17:17093000-17104800 Weak transcription Hela-S3 cervix
18 chr17:17093200-17095800 Enhancers Skeletal Muscle Female skeletal muscle
19 chr17:17093400-17096200 Enhancers NHLF lung
20 chr17:17093600-17102400 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr17:17093600-17103400 Weak transcription Fetal Thymus thymus
22 chr17:17093600-17104400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr17:17093600-17107400 Weak transcription Dnd41 blood
24 chr17:17093600-17108400 Weak transcription Thymus Thymus
25 chr17:17093800-17096600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
26 chr17:17093800-17096600 Enhancers Brain Anterior Caudate brain
27 chr17:17093800-17097200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr17:17093800-17103400 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr17:17093800-17104000 Weak transcription Fetal Intestine Small intestine
30 chr17:17093800-17104200 Weak transcription Primary T cells fromperipheralblood blood
31 chr17:17093800-17105400 Weak transcription Pancreas Pancrea
32 chr17:17093800-17105600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr17:17093800-17105600 Weak transcription Esophagus oesophagus
34 chr17:17093800-17107400 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr17:17093800-17107600 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr17:17094000-17103400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr17:17094000-17104600 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr17:17094000-17107200 Weak transcription Aorta Aorta
39 chr17:17094200-17096000 Enhancers Fetal Heart heart
40 chr17:17094200-17100600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr17:17094200-17100600 Weak transcription Fetal Lung lung
42 chr17:17094200-17104800 Weak transcription HepG2 liver
43 chr17:17094400-17096000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
44 chr17:17094400-17103200 Weak transcription Primary T cells from cord blood blood
45 chr17:17094600-17095800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr17:17094600-17095800 Enhancers Ovary ovary
47 chr17:17094600-17096200 Enhancers Cortex derived primary cultured neurospheres brain
48 chr17:17094600-17096600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
49 chr17:17094800-17095800 Enhancers Fetal Brain Male brain
50 chr17:17094800-17095800 Enhancers Fetal Muscle Leg muscle

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Last update: Aug 31, 2015