The 2.0 version of rSNPBase

Variant report

Variant rs991562
Chromosome Location chr1:94783732-94783733
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94774600-94787800 Weak transcription Aorta Aorta
2 chr1:94776600-94784000 Weak transcription Lung lung
3 chr1:94776600-94785200 Weak transcription Left Ventricle heart
4 chr1:94776600-94790400 Weak transcription Psoas Muscle Psoas
5 chr1:94776800-94784600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:94777000-94784000 Weak transcription Gastric stomach
7 chr1:94777000-94785000 Weak transcription Right Atrium heart
8 chr1:94777000-94785200 Weak transcription Fetal Muscle Leg muscle
9 chr1:94778600-94790400 Weak transcription Spleen Spleen
10 chr1:94780200-94784000 Weak transcription Pancreas Pancrea
11 chr1:94781400-94784000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr1:94781400-94785800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:94781600-94784800 Enhancers HUVEC blood vessel
14 chr1:94781800-94784800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr1:94781800-94785200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:94782000-94784600 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr1:94782000-94785000 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr1:94782000-94785200 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr1:94782200-94784800 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr1:94782200-94784800 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr1:94782800-94784200 Weak transcription Stomach Mucosa stomach
22 chr1:94782800-94789000 Weak transcription Fetal Kidney kidney
23 chr1:94783000-94789400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:94783200-94784600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:94783200-94784800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr1:94783200-94784800 Weak transcription Osteobl bone
27 chr1:94783200-94785000 Weak transcription NHDF-Ad bronchial
28 chr1:94783200-94786000 Enhancers HepG2 liver
29 chr1:94783200-94787200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:94783200-94787200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:94783200-94787200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:94783200-94787400 Weak transcription HSMM muscle
33 chr1:94783200-94787800 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:94783200-94788400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:94783200-94792800 Weak transcription Fetal Intestine Small intestine
36 chr1:94783400-94784000 Enhancers Fetal Heart heart
37 chr1:94783400-94784800 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:94783400-94785000 Weak transcription NH-A brain
39 chr1:94783400-94787400 Enhancers A549 lung
40 chr1:94783600-94784000 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:94783600-94784200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr1:94783600-94784800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr1:94783600-94784800 Weak transcription HMEC breast
44 chr1:94783600-94787000 Weak transcription NHEK skin
45 chr1:94783600-94787800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015