The 2.0 version of rSNPBase

Variant report

Variant rs1687966
Chromosome Location chr1:94777332-94777333
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94772000-94780600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:94772000-94781400 Weak transcription Osteobl bone
3 chr1:94774600-94787800 Weak transcription Aorta Aorta
4 chr1:94775000-94783000 Weak transcription Right Ventricle heart
5 chr1:94775600-94777600 Enhancers HUVEC blood vessel
6 chr1:94775800-94777600 Enhancers Stomach Mucosa stomach
7 chr1:94776400-94779800 Weak transcription A549 lung
8 chr1:94776400-94779800 Enhancers HepG2 liver
9 chr1:94776600-94778400 Weak transcription Spleen Spleen
10 chr1:94776600-94781400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:94776600-94781800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:94776600-94782000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr1:94776600-94784000 Weak transcription Lung lung
14 chr1:94776600-94785200 Weak transcription Left Ventricle heart
15 chr1:94776600-94790400 Weak transcription Psoas Muscle Psoas
16 chr1:94776800-94777800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:94776800-94779800 Weak transcription Fetal Intestine Large intestine
18 chr1:94776800-94779800 Weak transcription Pancreas Pancrea
19 chr1:94776800-94781400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:94776800-94781400 Weak transcription NHDF-Ad bronchial
21 chr1:94776800-94784600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:94777000-94778400 Weak transcription Fetal Intestine Small intestine
23 chr1:94777000-94779600 Weak transcription Liver Liver
24 chr1:94777000-94780000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:94777000-94782000 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:94777000-94784000 Weak transcription Gastric stomach
27 chr1:94777000-94785000 Weak transcription Right Atrium heart
28 chr1:94777000-94785200 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015