The 2.0 version of rSNPBase

Variant report

Variant rs1687961
Chromosome Location chr1:94769190-94769191
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94760600-94770000 Enhancers Primary monocytes fromperipheralblood blood
2 chr1:94762000-94769400 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr1:94763400-94775800 Weak transcription Psoas Muscle Psoas
4 chr1:94764800-94771200 Enhancers HUVEC blood vessel
5 chr1:94764800-94772000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:94765800-94769200 Enhancers Primary neutrophils fromperipheralblood blood
7 chr1:94765800-94770800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:94766000-94770000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr1:94766000-94770600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr1:94766000-94772600 Weak transcription Fetal Muscle Leg muscle
11 chr1:94766000-94774600 Weak transcription Fetal Lung lung
12 chr1:94766600-94775600 Weak transcription Small Intestine intestine
13 chr1:94767000-94770000 Weak transcription NHLF lung
14 chr1:94767200-94769400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:94767200-94769400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
16 chr1:94767200-94770000 Weak transcription HepG2 liver
17 chr1:94767200-94770000 Weak transcription Osteobl bone
18 chr1:94767200-94770200 Weak transcription NH-A brain
19 chr1:94767200-94775400 Weak transcription Liver Liver
20 chr1:94767400-94769400 Weak transcription Muscle Satellite Cultured Cells --
21 chr1:94767400-94769400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:94767400-94769400 Weak transcription NHEK skin
23 chr1:94767400-94769600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:94767400-94773400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:94767800-94769400 Weak transcription HMEC breast
26 chr1:94767800-94769800 Enhancers Primary hematopoietic stem cells blood
27 chr1:94767800-94769800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr1:94768000-94770000 Enhancers Primary hematopoietic stem cells short term culture blood
29 chr1:94768200-94769200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:94768200-94769800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:94768200-94771000 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr1:94768200-94774800 Weak transcription Spleen Spleen
33 chr1:94768400-94769800 Weak transcription NHDF-Ad bronchial
34 chr1:94768400-94770400 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr1:94768400-94770600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:94768400-94771000 Weak transcription Gastric stomach
37 chr1:94768400-94774200 Weak transcription Ovary ovary
38 chr1:94768400-94775800 Weak transcription Pancreas Pancrea
39 chr1:94768600-94769600 Weak transcription Lung lung
40 chr1:94768600-94770800 Weak transcription Left Ventricle heart
41 chr1:94768600-94771800 Weak transcription Adipose Nuclei Adipose
42 chr1:94768600-94774200 Weak transcription Right Atrium heart
43 chr1:94768600-94774200 Weak transcription Right Ventricle heart
44 chr1:94768800-94769200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015