Variant report

Variant	rs9919636
Chromosome Location	chr11:94292051-94292052
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:94276501..94280507-chr11:94288837..94292469,6	K562	blood:
2	chr11:94281593..94285373-chr11:94288859..94293120,4	K562	blood:
3	chr11:94291094..94292951-chr11:94297650..94300886,3	K562	blood:

Variant related genes	Relation type
ENSG00000134627	Chromatin interaction
ENSG00000196371	Chromatin interaction

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10741490	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10831239	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11020832	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11020851	0.82[ASN][1000 genomes]
rs1257380	0.82[ASN][1000 genomes]
rs591584	0.82[ASN][1000 genomes]
rs6483346	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6483348	0.82[ASN][1000 genomes]
rs7926082	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7926234	0.89[ASN][1000 genomes]
rs7927312	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7927463	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7929056	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7946385	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7946916	0.89[EUR][1000 genomes]
rs7950626	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:46 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94279200-94296000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr11:94280600-94296200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr11:94281000-94319200	Weak transcription	Aorta	Aorta
4	chr11:94282000-94296000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr11:94282200-94317400	Weak transcription	Stomach Smooth Muscle	stomach
6	chr11:94282200-94322600	Weak transcription	Brain Anterior Caudate	brain
7	chr11:94282600-94296200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr11:94282600-94298200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr11:94282600-94322200	Weak transcription	Fetal Stomach	stomach
10	chr11:94283400-94292600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr11:94284000-94292600	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr11:94284000-94296400	Weak transcription	Duodenum Mucosa	Duodenum
13	chr11:94284000-94323400	Weak transcription	Fetal Muscle Leg	muscle
14	chr11:94284200-94303400	Weak transcription	Rectal Mucosa Donor 31	rectum
15	chr11:94287600-94293200	Weak transcription	Gastric	stomach
16	chr11:94287600-94294200	Enhancers	Primary neutrophils fromperipheralblood	blood
17	chr11:94287600-94296200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr11:94287600-94297000	Weak transcription	Fetal Intestine Small	intestine
19	chr11:94287800-94292800	Weak transcription	Stomach Mucosa	stomach
20	chr11:94287800-94297400	Weak transcription	Small Intestine	intestine
21	chr11:94288000-94296200	Weak transcription	Pancreas	Pancrea
22	chr11:94289800-94293000	Enhancers	Osteobl	bone
23	chr11:94289800-94293800	Enhancers	Primary monocytes fromperipheralblood	blood
24	chr11:94290000-94293000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr11:94290200-94293600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr11:94290600-94296000	Weak transcription	Placenta Amnion	Placenta Amnion
27	chr11:94291000-94296200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr11:94291200-94293000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr11:94291200-94293000	Enhancers	Muscle Satellite Cultured Cells	--
30	chr11:94291400-94292600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
31	chr11:94291400-94292800	Enhancers	Primary hematopoietic stem cells short term culture	blood
32	chr11:94291400-94293000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr11:94291400-94293600	Enhancers	K562	blood
34	chr11:94291600-94292400	Enhancers	Primary hematopoietic stem cells	blood
35	chr11:94291600-94296000	Weak transcription	NH-A	brain
36	chr11:94291600-94296200	Weak transcription	HSMM	muscle
37	chr11:94291600-94296400	Weak transcription	Duodenum Smooth Muscle	Duodenum
38	chr11:94291800-94292200	Enhancers	Primary B cells from peripheral blood	blood
39	chr11:94291800-94292800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr11:94291800-94296200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr11:94291800-94296400	Weak transcription	Fetal Intestine Large	intestine
42	chr11:94291800-94322000	Weak transcription	Colon Smooth Muscle	Colon
43	chr11:94292000-94292400	Weak transcription	NHDF-Ad	bronchial
44	chr11:94292000-94292600	Enhancers	Primary B cells from cord blood	blood
45	chr11:94292000-94296400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr11:94292000-94296400	Weak transcription	NHLF	lung

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