Variant report

Variant	rs9948520
Chromosome Location	chr18:8669810-8669811
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:8659422..8661406-chr18:8668712..8671092,2	K562	blood:
2	chr18:8668588..8670326-chr18:8673420..8675125,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11081403	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11660801	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12455004	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12604208	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12955230	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12959591	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17479191	0.87[ASN][1000 genomes]
rs34460428	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35195807	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs392603	0.89[CHB][hapmap];0.82[ASN][1000 genomes]
rs4797324	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4798668	0.87[ASN][1000 genomes]
rs4798670	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs529984	0.88[ASN][1000 genomes]
rs538700	0.87[ASN][1000 genomes]
rs580402	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs601126	0.87[ASN][1000 genomes]
rs62086810	0.81[ASN][1000 genomes]
rs62086811	0.83[ASN][1000 genomes]
rs7226626	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7240298	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7241887	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8086478	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8092876	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8095368	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9675533	0.88[ASN][1000 genomes]
rs9676017	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:8653800-8703400	Weak transcription	Right Atrium	heart
2	chr18:8662200-8673400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr18:8663400-8671800	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr18:8666000-8670600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr18:8667000-8672800	Weak transcription	A549	lung
6	chr18:8668600-8671800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
7	chr18:8668800-8673000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr18:8669200-8670000	Enhancers	HUVEC	blood vessel
9	chr18:8669600-8672200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr18:8669600-8674000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr18:8669800-8671800	Weak transcription	HUES48 Cell Line	embryonic stem cell

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