Variant report

Variant nsv1049442
Chromosome Location chr10:55638740-55681002
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:55645800-55646600 Enhancers Liver Liver
2 chr10:55646000-55646800 Enhancers Fetal Intestine Small intestine
3 chr10:55646000-55647000 Enhancers Rectal Mucosa Donor 31 rectum
4 chr10:55646200-55646600 Enhancers Fetal Intestine Large intestine
5 chr10:55646200-55646600 Active TSS A549 lung
6 chr10:55646200-55647200 Enhancers HepG2 liver
7 chr10:55646600-55646800 Enhancers Duodenum Mucosa Duodenum
8 chr10:55646600-55647000 Flanking Active TSS Liver Liver
9 chr10:55646600-55647000 Enhancers Rectal Mucosa Donor 29 rectum
10 chr10:55646600-55647000 Flanking Active TSS A549 lung
11 chr10:55646800-55647000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr10:55647000-55647200 Enhancers A549 lung
13 chr10:55654000-55654200 Enhancers Fetal Intestine Small intestine
14 chr10:55654000-55654600 Enhancers HepG2 liver
15 chr10:55654000-55655000 Enhancers Stomach Smooth Muscle stomach
16 chr10:55654200-55658400 Weak transcription Fetal Intestine Small intestine
17 chr10:55658200-55658600 Enhancers Fetal Kidney kidney
18 chr10:55658200-55658600 Enhancers NHEK skin
19 chr10:55658200-55658800 Enhancers Fetal Intestine Large intestine
20 chr10:55658400-55658600 Enhancers Fetal Intestine Small intestine
21 chr10:55658600-55659000 Weak transcription Fetal Kidney kidney
22 chr10:55658600-55659400 Weak transcription Fetal Intestine Small intestine
23 chr10:55658600-55663000 Weak transcription NHEK skin
24 chr10:55658800-55659200 Weak transcription Fetal Intestine Large intestine
25 chr10:55659000-55660600 Enhancers Fetal Kidney kidney
26 chr10:55659200-55660600 Enhancers Fetal Intestine Large intestine
27 chr10:55659400-55660200 Enhancers Colon Smooth Muscle Colon
28 chr10:55659400-55660600 Enhancers Fetal Intestine Small intestine
29 chr10:55659800-55660200 Bivalent/Poised TSS Breast Myoepithelial Primary Cells Breast
30 chr10:55659800-55660400 Enhancers Fetal Stomach stomach
31 chr10:55660600-55661800 Weak transcription Fetal Intestine Small intestine
32 chr10:55660600-55661800 Weak transcription Fetal Kidney kidney
33 chr10:55661400-55662200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr10:55662000-55662200 Enhancers Fetal Intestine Small intestine
35 chr10:55662000-55662200 Enhancers Fetal Kidney kidney
36 chr10:55662800-55663200 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr10:55662800-55663200 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr10:55662800-55663200 Enhancers iPS-20b Cell Line embryonic stem cell
39 chr10:55662800-55664000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr10:55662800-55664400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr10:55663000-55665200 Enhancers NHEK skin
42 chr10:55663200-55664400 Enhancers HMEC breast
43 chr10:55664000-55664200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr10:55664000-55665000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr10:55664200-55665400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr10:55664400-55664800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr10:55664400-55664800 Active TSS HMEC breast
48 chr10:55664400-55665000 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr10:55664800-55665200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr10:55664800-55665400 Enhancers HMEC breast

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