Variant report

Variant	nsv289
Chromosome Location	chr6:149864898-149998818
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3177)
CpG islands
(count:2320)
Chromatin interactive
region (count:176)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:5)

(count:3177 , 50 per page) page: 1 2 3 4 5 6 7 ... 64

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:149886279-149886406	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:149881799-149881999	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:149969534-149970341	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:149936952-149937139	K562	blood:	n/a	n/a
5	ARID3A	chr6:149867131-149867424	K562	blood:	n/a	n/a
6	ARID3A	chr6:149886665-149887092	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:149888048-149888244	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:149969734-149969759	K562	blood:	n/a	n/a
9	ARID3A	chr6:149886697-149887266	K562	blood:	n/a	n/a
10	ARID3A	chr6:149967589-149968149	K562	blood:	n/a	n/a
11	ARID3A	chr6:149867025-149867733	HepG2	liver:	n/a	n/a
12	ATF1	chr6:149866185-149866751	K562	blood:	n/a	n/a
13	ATF1	chr6:149866952-149867919	K562	blood:	n/a	n/a
14	ATF2	chr6:149969710-149970233	GM12878	blood:	n/a	n/a
15	ATF2	chr6:149969592-149970147	GM12878	blood:	n/a	n/a
16	ATF2	chr6:149866820-149867605	GM12878	blood:	n/a	n/a
17	ATF2	chr6:149887992-149889571	GM12878	blood:	n/a	n/a
18	ATF2	chr6:149886462-149887374	GM12878	blood:	n/a	n/a
19	ATF2	chr6:149969524-149970149	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF2	chr6:149972099-149972644	GM12878	blood:	n/a	n/a
21	ATF2	chr6:149949987-149950716	GM12878	blood:	n/a	n/a
22	ATF2	chr6:149866988-149867601	H1-hESC	embryonic stem cell:	n/a	n/a
23	ATF2	chr6:149886581-149887245	GM12878	blood:	n/a	n/a
24	ATF2	chr6:149866980-149867432	H1-hESC	embryonic stem cell:	n/a	n/a
25	ATF2	chr6:149888009-149888393	H1-hESC	embryonic stem cell:	n/a	n/a
26	ATF2	chr6:149969615-149970176	H1-hESC	embryonic stem cell:	n/a	n/a
27	ATF2	chr6:149866643-149867603	GM12878	blood:	n/a	n/a
28	ATF3	chr6:149867030-149867572	HepG2	liver:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
29	ATF3	chr6:149866969-149867531	GM12878	blood:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
30	ATF3	chr6:149866927-149867416	H1-hESC	embryonic stem cell:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
31	ATF3	chr6:149866926-149867543	K562	blood:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
32	ATF3	chr6:149867099-149867415	GM12878	blood:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
33	ATF3	chr6:149866949-149867588	H1-hESC	embryonic stem cell:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
34	ATF3	chr6:149969644-149970060	K562	blood:	n/a	n/a
35	ATF3	chr6:149866961-149867613	K562	blood:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
36	ATF3	chr6:149866926-149867588	HepG2	liver:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
37	ATF3	chr6:149867123-149867591	A549	lung:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
38	ATF3	chr6:149866964-149867636	K562	blood:	n/a	chr6:149867350-149867359 chr6:149867243-149867263
39	BACH1	chr6:149867109-149867611	H1-hESC	embryonic stem cell:	n/a	n/a
40	BACH1	chr6:149868556-149868589	H1-hESC	embryonic stem cell:	n/a	n/a
41	BACH1	chr6:149887538-149888320	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr6:149866227-149866688	K562	blood:	n/a	n/a
43	BACH1	chr6:149867298-149867435	K562	blood:	n/a	n/a
44	BACH1	chr6:149916655-149916831	K562	blood:	n/a	n/a
45	BACH1	chr6:149886878-149887267	H1-hESC	embryonic stem cell:	n/a	n/a
46	BACH1	chr6:149969410-149969451	H1-hESC	embryonic stem cell:	n/a	n/a
47	BACH1	chr6:149969659-149970209	H1-hESC	embryonic stem cell:	n/a	n/a
48	BACH1	chr6:149900202-149900205	H1-hESC	embryonic stem cell:	n/a	n/a
49	BATF	chr6:149867070-149867356	GM12878	blood:	n/a	n/a
50	BATF	chr6:149972219-149972600	GM12878	blood:	n/a	n/a

(count:2320 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:149969835-149969885	Jurkat	blood:	n/a
2	chr6:149867442-149867492	PFSK-1	brain:	n/a
3	chr6:149969835-149969885	Jurkat	blood:	n/a
4	chr6:149867442-149867492	PFSK-1	brain:	n/a
5	chr6:149982378-149982428	GM06990	blood:	n/a
6	chr6:149887498-149887548	PANC-1	pancreas:	n/a
7	chr6:149869713-149869763	NH-A	brain:	n/a
8	chr6:149911999-149912049	NH-A	brain:	n/a
9	chr6:149869713-149869763	Hepatocyte	liver:	n/a
10	chr6:149969568-149969618	SK-N-SH_RA	brain:	n/a
11	chr6:149969774-149969824	SK-N-SH	brain:	n/a
12	chr6:149927061-149927111	HCPEpiC	choroid plexus:	n/a
13	chr6:149887504-149887554	T-47D	breast:	n/a
14	chr6:149867378-149867428	PrEC	prostate:	n/a
15	chr6:149867939-149867989	HepG2	liver:	n/a
16	chr6:149969568-149969618	HAEpiC	amniotic membrane:	n/a
17	chr6:149888373-149888423	HRE	kidney:	n/a
18	chr6:149888373-149888423	NHDF-neo	bronchial:	n/a
19	chr6:149887504-149887554	HepG2	liver:	n/a
20	chr6:149866396-149866446	GM19239	blood:	n/a
21	chr6:149887876-149887926	NHDF-neo	bronchial:	n/a
22	chr6:149982378-149982428	SK-N-SH_RA	brain:	n/a
23	chr6:149982378-149982428	MCF10A-Er-Src	breast:	n/a
24	chr6:149887498-149887548	GM12878	blood:	n/a
25	chr6:149867378-149867428	CMK	blood:	n/a
26	chr6:149887573-149887623	NHBE	bronchial:	n/a
27	chr6:149867359-149867409	SAEC	small airway:	n/a
28	chr6:149867442-149867492	A549	lung:	n/a
29	chr6:149867607-149867657	HNPCEpiC	eye:	n/a
30	chr6:149886971-149887021	HepG2	liver:	n/a
31	chr6:149887573-149887623	LNCaP	prostate:	n/a
32	chr6:149867573-149867623	HCF	heart:	n/a
33	chr6:149887296-149887346	AoSMC	blood vessel:	n/a
34	chr6:149970148-149970198	RPTEC	kidney:	n/a
35	chr6:149886883-149886933	AG09309	skin:	n/a
36	chr6:149887498-149887548	HCT-116	colon:	n/a
37	chr6:149970148-149970198	HRPEpiC	eye:	n/a
38	chr6:149888373-149888423	HNPCEpiC	eye:	n/a
39	chr6:149867144-149867194	HCT-116	colon:	n/a
40	chr6:149867235-149867285	GM06990	blood:	n/a
41	chr6:149969835-149969885	IMR90	lung:	fetal
42	chr6:149886883-149886933	K562	blood:	n/a
43	chr6:149867442-149867492	BJ	skin:	n/a
44	chr6:149888373-149888423	MCF-7	breast:	n/a
45	chr6:149960166-149960216	NHBE	bronchial:	n/a
46	chr6:149867235-149867285	HCPEpiC	choroid plexus:	n/a
47	chr6:149969500-149969550	GM12878	blood:	n/a
48	chr6:149969835-149969885	RPTEC	kidney:	n/a
49	chr6:149867939-149867989	MCF-7	breast:	n/a
50	chr6:149867442-149867492	ovcar-3	ovarian:	n/a

(count:176 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr6:149927260..149929219-chr6:149933364..149935307,2	MCF-7	breast:
2	chr6:149887497..149889067-chr6:149953634..149955368,2	K562	blood:
3	chr6:149886793..149887314-chr6:150038696..150039225,2	MCF-7	breast:
4	chr6:149920411..149922335-chr6:149967017..149968903,2	K562	blood:
5	chr6:149971279..149975034-chr6:149981677..149984189,3	K562	blood:
6	chr13:79980255..79980778-chr6:149887542..149888222,2	Hela-S3	cervix:
7	chr6:149911768..149915341-chr6:149918600..149921005,3	K562	blood:
8	chr6:149938577..149941388-chr6:149968013..149970369,3	K562	blood:
9	chr6:149886502..149888168-chr6:150070978..150072960,2	K562	blood:
10	chr6:149865083..149869048-chr6:149884009..149889859,10	MCF-7	breast:
11	chr6:149927260..149929219-chr6:149933364..149935307,2	MCF-7	breast:
12	chr6:149969356..149971022-chr6:149980970..149983817,2	K562	blood:
13	chr6:149865149..149869984-chr6:149967517..149970273,6	K562	blood:
14	chr6:149863614..149866317-chr6:150041414..150044208,2	K562	blood:
15	chr6:149971462..149974474-chr6:149978502..149980878,3	K562	blood:
16	chr6:149865922..149868686-chr6:149869430..149871815,2	MCF-7	breast:
17	chr6:149863889..149870301-chr6:149880315..149888361,14	K562	blood:
18	chr6:149865611..149871097-chr6:149883709..149888968,8	K562	blood:
19	chr6:149908198..149910357-chr6:149912018..149914199,2	K562	blood:
20	chr6:149864361..149868960-chr6:149967728..149970352,9	K562	blood:
21	chr6:149891208..149893657-chr6:149895045..149897012,2	K562	blood:
22	chr6:149886717..149888905-chr6:150037583..150040474,2	MCF-7	breast:
23	chr6:149864573..149867229-chr6:150066856..150070071,3	K562	blood:
24	chr6:149866797..149869221-chr6:150037385..150040762,4	K562	blood:
25	chr6:149954650..149956610-chr6:149965636..149967604,2	K562	blood:
26	chr6:149958989..149961002-chr6:149965990..149968942,2	MCF-7	breast:
27	chr6:149894224..149896092-chr6:149966724..149969015,2	K562	blood:
28	chr6:149971462..149974474-chr6:149978502..149980878,3	K562	blood:
29	chr6:149862349..149865484-chr6:149865615..149868739,5	MCF-7	breast:
30	chr6:149891775..149893558-chr6:149966208..149969177,2	K562	blood:
31	chr6:149887084..149888200-chr6:149967090..149968152,3	MCF-7	breast:
32	chr6:149901536..149903153-chr6:149911494..149913834,2	K562	blood:
33	chr6:149887413..149889033-chr6:149958089..149960817,2	K562	blood:
34	chr6:149867194..149867778-chr6:150247038..150247929,2	MCF-7	breast:
35	chr6:149864025..149866491-chr6:150038497..150040918,2	K562	blood:
36	chr6:149865819..149869096-chr6:149885709..149888757,8	MCF-7	breast:
37	chr6:149872312..149874761-chr6:149886918..149888794,2	K562	blood:
38	chr6:149971297..149973652-chr6:149995511..149997067,2	K562	blood:
39	chr6:149972169..149975034-chr6:149981677..149983455,2	K562	blood:
40	chr6:149867616..149870939-chr6:149871869..149874577,3	K562	blood:
41	chr6:149887426..149891060-chr6:150037726..150040656,4	K562	blood:
42	chr6:149920411..149922335-chr6:149967017..149969347,3	K562	blood:
43	chr6:149962904..149965459-chr6:150070151..150071735,2	K562	blood:
44	chr6:149934412..149936656-chr6:149968719..149970315,2	MCF-7	breast:
45	chr6:149946699..149949049-chr6:149967559..149970379,2	K562	blood:
46	chr6:149969073..149971280-chr6:149979512..149981735,2	MCF-7	breast:
47	chr6:149976600..149978666-chr6:149982921..149985539,2	K562	blood:
48	chr6:149865699..149869050-chr6:149878682..149882030,3	MCF-7	breast:
49	chr6:149902583..149905238-chr6:149907236..149909070,2	K562	blood:
50	chr6:149968503..149970846-chr6:149975810..149979709,4	K562	blood:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KATNA1-1	chr6:149913750-149913799	XLOC_005875
2	lnc-KATNA1-2	chr6:149896841-149897072	ENSG00000237502.1
3	lnc-C6orf72-1	chr6:149882288-149882365	XLOC_005498
4	lnc-KATNA1-2	chr6:149896601-149897260	ENSG00000237502.2
5	lnc-C6orf72-1	chr6:149884786-149885085	XLOC_005498
6	lnc-C6orf72-3	chr6:149926479-149926778	NONHSAT115507
7	lnc-KATNA1-2	chr6:149897131-149897260	ENSG00000237502.1
8	lnc-C6orf72-3	chr6:149923981-149924058	NONHSAT115507
9	lnc-KATNA1-1	chr6:149912891-149913180	XLOC_005875

No data

(count:5 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	LATS1	hsa-miR-21-5p	chr6:149982401-149982394
2	LATS1	hsa-miR-21-5p	chr6:149982541-149982561
3	LATS1	hsa-miR-16-5p	chr6:149982125-149982147
4	LATS1	hsa-miR-103a-3p	chr6:149982126-149982148
5	LATS1	hsa-miR-21-5p	chr6:149982395-149982416

Variant related genes	Relation type
ENSG00000202343	TF binding region
PPIL4	TF binding region
GINM1	TF binding region
ENSG00000237502	TF binding region
KATNA1	TF binding region
ENSG00000207292	TF binding region
RPS18P9	TF binding region
ENSG00000235168	TF binding region
ENSG00000233330	TF binding region
ENSG00000202343	CpG island
PPIL4	CpG island
GINM1	CpG island
ENSG00000237502	CpG island
KATNA1	CpG island
ENSG00000207292	CpG island
RPS18P9	CpG island
ENSG00000235168	CpG island
ENSG00000233330	CpG island
ENSG00000181472	chromatin interactions
ENSG00000202343	chromatin interactions
ENSG00000139746	chromatin interactions
ENSG00000055208	chromatin interactions
ENSG00000186625	chromatin interactions
ENSG00000131023	chromatin interactions
ENSG00000233330	chromatin interactions
ENSG00000120265	chromatin interactions
ENSG00000268592	chromatin interactions
ENSG00000120253	chromatin interactions
ENSG00000184465	chromatin interactions
ENSG00000203722	chromatin interactions
ENSG00000055211	chromatin interactions
ENSG00000185127	chromatin interactions
ENSG00000120256	chromatin interactions
ENSG00000235168	chromatin interactions
ENSG00000131013	chromatin interactions
ENSG00000220848	chromatin interactions
ENSG00000237502	chromatin interactions
ENSG00000227354	chromatin interactions

Extended variants
information (count: 4860 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:4860 , 50 per page) page: 1 2 3 4 5 6 7 ... 98

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs35625918	chr6:149864909-149864910	Weak transcription Enhancers Genic enhancers Flanking Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs375117159	chr6:149865000-149865001	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs552580142	chr6:149865005-149865006	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs565919182	chr6:149865013-149865014	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs535149059	chr6:149865068-149865069	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
6	rs548367719	chr6:149865077-149865078	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
7	rs28661265	chr6:149865116-149865117	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs371405699	chr6:149865177-149865178	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs183517070	chr6:149865180-149865181	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs551595139	chr6:149865185-149865186	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs116862716	chr6:149865218-149865219	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs562171507	chr6:149865252-149865253	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs540130188	chr6:149865258-149865259	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs151268632	chr6:149865260-149865261	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs62442798	chr6:149865296-149865297	Weak transcription Flanking Active TSS Enhancers Genic enhancers Active TSS	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs186701555	chr6:149865408-149865409	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
17	rs541923099	chr6:149865425-149865426	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
18	rs139552444	chr6:149865517-149865518	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
19	rs557191788	chr6:149865522-149865523	Weak transcription Flanking Active TSS Enhancers Active TSS Genic enhancers	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
20	rs144211370	chr6:149865613-149865614	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
21	rs544047371	chr6:149865628-149865629	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
22	rs563930246	chr6:149865641-149865642	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
23	rs527868753	chr6:149865669-149865670	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
24	rs546556955	chr6:149865690-149865691	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
25	rs559718842	chr6:149865700-149865701	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
26	rs190030670	chr6:149865774-149865775	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
27	rs146539396	chr6:149865785-149865786	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
28	rs141118976	chr6:149865789-149865790	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
29	rs531025924	chr6:149865792-149865793	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
30	rs551240446	chr6:149865831-149865832	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
31	rs376452368	chr6:149865900-149865901	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
32	rs571044828	chr6:149865921-149865922	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
33	rs116309446	chr6:149865982-149865983	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
34	rs150157055	chr6:149866099-149866100	Active TSS Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
35	rs145587709	chr6:149866101-149866102	Active TSS Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
36	rs182647698	chr6:149866102-149866103	Active TSS Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
37	rs35614422	chr6:149866163-149866164	Active TSS Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
38	rs555338332	chr6:149866240-149866241	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
39	rs187003423	chr6:149866242-149866243	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
40	rs543888319	chr6:149866274-149866275	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
41	rs76072715	chr6:149866318-149866319	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
42	rs577389573	chr6:149866379-149866380	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
43	rs192707187	chr6:149866398-149866399	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
44	rs9404042	chr6:149866452-149866453	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
45	rs183550287	chr6:149866485-149866486	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
46	rs541907708	chr6:149866512-149866513	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
47	rs562056793	chr6:149866518-149866519	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
48	rs143511137	chr6:149866519-149866520	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
49	rs551074825	chr6:149866550-149866551	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
50	rs571068633	chr6:149866598-149866599	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Soft tissue tumor	16732325	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
Cancer	17160897	CNVD
Breast cancer	17417639	CNVD
Breast cancer	17850661	CNVD
Renal cell carcinoma	18765545	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Ovarian neoplasms	16753589	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20556506	CNVD
Hirschsprung''s Disease	21712996	CNVD
Testicular germ cell tumor	18059402	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Lung adenocarcinoma	21935476	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD

Chromatin state (count:4331 , 50 per page) page: 1 2 3 4 5 6 7 ... 87

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:149820600-149865200	Weak transcription	Stomach Mucosa	stomach
2	chr6:149830600-149865600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr6:149832000-149865800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr6:149837400-149866000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr6:149841200-149865200	Weak transcription	Fetal Heart	heart
6	chr6:149849400-149865200	Weak transcription	Psoas Muscle	Psoas
7	chr6:149850800-149865600	Weak transcription	Right Ventricle	heart
8	chr6:149852400-149865800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr6:149855600-149865200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr6:149855800-149865200	Weak transcription	Hela-S3	cervix
11	chr6:149860800-149865200	Weak transcription	Rectal Smooth Muscle	rectum
12	chr6:149860800-149865400	Weak transcription	Colonic Mucosa	Colon
13	chr6:149860800-149865400	Weak transcription	Fetal Brain Male	brain
14	chr6:149861000-149865200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr6:149861000-149865200	Weak transcription	Brain Hippocampus Middle	brain
16	chr6:149861000-149865200	Weak transcription	Gastric	stomach
17	chr6:149861000-149865400	Weak transcription	A549	lung
18	chr6:149861000-149865400	Weak transcription	HUVEC	blood vessel
19	chr6:149861000-149865600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr6:149861000-149865600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
21	chr6:149861000-149865800	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr6:149861200-149865800	Weak transcription	Aorta	Aorta
23	chr6:149861200-149865800	Weak transcription	Esophagus	oesophagus
24	chr6:149861600-149865200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr6:149861600-149865400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr6:149861600-149865400	Weak transcription	Brain Substantia Nigra	brain
27	chr6:149861600-149865400	Weak transcription	HSMMtube	muscle
28	chr6:149861800-149865000	Weak transcription	Brain Germinal Matrix	brain
29	chr6:149861800-149865200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr6:149861800-149865200	Weak transcription	Fetal Intestine Small	intestine
31	chr6:149861800-149865200	Weak transcription	Spleen	Spleen
32	chr6:149861800-149865600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr6:149861800-149865600	Weak transcription	Fetal Stomach	stomach
34	chr6:149861800-149865800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
35	chr6:149861800-149865800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr6:149861800-149865800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
37	chr6:149861800-149865800	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr6:149861800-149865800	Weak transcription	Lung	lung
39	chr6:149861800-149865800	Weak transcription	Pancreas	Pancrea
40	chr6:149862000-149865200	Weak transcription	Placenta Amnion	Placenta Amnion
41	chr6:149862200-149865000	Weak transcription	Adipose Nuclei	Adipose
42	chr6:149862200-149865000	Weak transcription	Duodenum Mucosa	Duodenum
43	chr6:149862200-149865000	Weak transcription	Skeletal Muscle Male	skeletal muscle
44	chr6:149862200-149865000	Weak transcription	Osteobl	bone
45	chr6:149862200-149865200	Weak transcription	Primary T cells fromperipheralblood	blood
46	chr6:149862200-149865200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr6:149862200-149865200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
48	chr6:149862200-149865200	Weak transcription	Fetal Kidney	kidney
49	chr6:149862200-149865200	Weak transcription	Fetal Lung	lung
50	chr6:149862200-149865200	Weak transcription	Fetal Muscle Leg	muscle

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