The 2.0 version of rSNPBase

Variant report

Variant rs10000055
Chromosome Location chr4:77882460-77882461
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77872600-77890800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr4:77872600-77894400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:77872600-77899200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr4:77872600-77900400 Weak transcription Placenta Amnion Placenta Amnion
5 chr4:77873000-77883400 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr4:77873000-77885800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr4:77873000-77899200 Weak transcription Primary hematopoietic stem cells blood
8 chr4:77873400-77884000 Weak transcription Rectal Smooth Muscle rectum
9 chr4:77873400-77894200 Weak transcription Fetal Muscle Trunk muscle
10 chr4:77873400-77894400 Weak transcription NHEK skin
11 chr4:77874200-77885600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr4:77874400-77891000 Weak transcription K562 blood
13 chr4:77875400-77884400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr4:77876000-77887200 Weak transcription HMEC breast
15 chr4:77876000-77895200 Weak transcription Aorta Aorta
16 chr4:77876400-77891200 Weak transcription HUVEC blood vessel
17 chr4:77876600-77883600 Weak transcription Brain Angular Gyrus brain
18 chr4:77876600-77887200 Weak transcription Psoas Muscle Psoas
19 chr4:77876600-77895400 Weak transcription Right Atrium heart
20 chr4:77876800-77906000 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr4:77877800-77890400 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr4:77878000-77883600 Weak transcription Fetal Brain Female brain
23 chr4:77878000-77890400 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr4:77878400-77883400 Weak transcription Fetal Brain Male brain
25 chr4:77878400-77890600 Weak transcription Ovary ovary
26 chr4:77878600-77882600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr4:77878600-77885800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr4:77878600-77888200 Weak transcription Fetal Muscle Leg muscle
29 chr4:77878800-77883400 Weak transcription Adipose Nuclei Adipose
30 chr4:77878800-77883600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr4:77878800-77883800 Weak transcription Fetal Kidney kidney
32 chr4:77878800-77884400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr4:77878800-77899200 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr4:77879000-77883400 Weak transcription Liver Liver
35 chr4:77879000-77893600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
36 chr4:77879000-77894400 Weak transcription Fetal Stomach stomach
37 chr4:77879000-77898400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr4:77879600-77893400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr4:77879600-77894200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr4:77879600-77904200 Weak transcription Gastric stomach
41 chr4:77880400-77883400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr4:77880400-77884000 Weak transcription Placenta Placenta
43 chr4:77880400-77884400 Weak transcription Pancreas Pancrea
44 chr4:77881200-77883000 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr4:77881200-77883000 Genic enhancers NHDF-Ad bronchial
46 chr4:77881200-77883200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr4:77881200-77883200 Weak transcription Osteobl bone
48 chr4:77881200-77889800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr4:77881400-77883600 Strong transcription Muscle Satellite Cultured Cells --
50 chr4:77881400-77884000 Enhancers Brain Germinal Matrix brain

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Last update: Aug 31, 2015