The 2.0 version of rSNPBase

Variant report

Variant rs10003222
Chromosome Location chr4:77883498-77883499
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:77872600-77890800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr4:77872600-77894400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:77872600-77899200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr4:77872600-77900400 Weak transcription Placenta Amnion Placenta Amnion
5 chr4:77873000-77885800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr4:77873000-77899200 Weak transcription Primary hematopoietic stem cells blood
7 chr4:77873400-77884000 Weak transcription Rectal Smooth Muscle rectum
8 chr4:77873400-77894200 Weak transcription Fetal Muscle Trunk muscle
9 chr4:77873400-77894400 Weak transcription NHEK skin
10 chr4:77874200-77885600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr4:77874400-77891000 Weak transcription K562 blood
12 chr4:77875400-77884400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr4:77876000-77887200 Weak transcription HMEC breast
14 chr4:77876000-77895200 Weak transcription Aorta Aorta
15 chr4:77876400-77891200 Weak transcription HUVEC blood vessel
16 chr4:77876600-77883600 Weak transcription Brain Angular Gyrus brain
17 chr4:77876600-77887200 Weak transcription Psoas Muscle Psoas
18 chr4:77876600-77895400 Weak transcription Right Atrium heart
19 chr4:77876800-77906000 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr4:77877800-77890400 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr4:77878000-77883600 Weak transcription Fetal Brain Female brain
22 chr4:77878000-77890400 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr4:77878400-77890600 Weak transcription Ovary ovary
24 chr4:77878600-77885800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr4:77878600-77888200 Weak transcription Fetal Muscle Leg muscle
26 chr4:77878800-77883600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr4:77878800-77883800 Weak transcription Fetal Kidney kidney
28 chr4:77878800-77884400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr4:77878800-77899200 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr4:77879000-77893600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr4:77879000-77894400 Weak transcription Fetal Stomach stomach
32 chr4:77879000-77898400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr4:77879600-77893400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr4:77879600-77894200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr4:77879600-77904200 Weak transcription Gastric stomach
36 chr4:77880400-77884000 Weak transcription Placenta Placenta
37 chr4:77880400-77884400 Weak transcription Pancreas Pancrea
38 chr4:77881200-77889800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr4:77881400-77883600 Strong transcription Muscle Satellite Cultured Cells --
40 chr4:77881400-77884000 Enhancers Brain Germinal Matrix brain
41 chr4:77881600-77884800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr4:77881600-77885600 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr4:77881600-77891200 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr4:77881600-77899200 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr4:77881800-77889800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr4:77882000-77883800 Enhancers NHLF lung
47 chr4:77882000-77885400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr4:77882000-77885800 Weak transcription Primary T cells from cord blood blood
49 chr4:77882000-77885800 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr4:77882000-77886000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015