Variant report

Variant	rs1001407
Chromosome Location	chr15:52784205-52784206
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:52783522..52785141-chr15:52819333..52821090,2	MCF-7	breast:
2	chr15:52782555..52786559-chr15:52788524..52791233,4	MCF-7	breast:
3	chr15:52782374..52785107-chr15:52859871..52862503,3	MCF-7	breast:
4	chr15:52777388..52778998-chr15:52782718..52784965,2	K562	blood:
5	chr15:52779012..52781482-chr15:52782947..52786199,3	K562	blood:
6	chr15:52777384..52780171-chr15:52780757..52785344,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000128989	Chromatin interaction
ENSG00000197535	Chromatin interaction

Extended variants
information (count: 257 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:253)

rs_ID	r²[population]
rs10518689	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10518691	0.92[EUR][1000 genomes]
rs10851514	0.92[EUR][1000 genomes]
rs10851515	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10851516	0.92[EUR][1000 genomes]
rs10851517	0.92[EUR][1000 genomes]
rs11070898	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11070899	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11070900	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11631183	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11852250	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11852261	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11852555	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11852556	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11852880	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11853078	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11853114	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11853179	0.84[EUR][1000 genomes]
rs11853237	0.89[EUR][1000 genomes]
rs11853337	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11853455	0.92[EUR][1000 genomes]
rs11853544	0.95[EUR][1000 genomes]
rs11853586	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11853802	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11853875	0.92[EUR][1000 genomes]
rs11854130	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11854247	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11854363	0.89[EUR][1000 genomes]
rs11854405	0.97[EUR][1000 genomes]
rs11854456	0.92[EUR][1000 genomes]
rs11854480	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11854498	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11854642	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11854673	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11854780	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11855082	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11855252	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11855257	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11855295	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11855352	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11855438	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11855453	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11855467	0.97[EUR][1000 genomes]
rs11855584	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11855640	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11855673	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11855692	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11855820	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11855884	0.90[EUR][1000 genomes]
rs11856242	0.89[EUR][1000 genomes]
rs11856494	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11856542	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11856588	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11856626	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11856662	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11856752	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11856810	0.90[EUR][1000 genomes]
rs11856912	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11856989	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11857854	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11857914	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11857993	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11858031	0.90[EUR][1000 genomes]
rs11858321	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11858378	0.87[EUR][1000 genomes]
rs11858927	0.92[EUR][1000 genomes]
rs12915869	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs1464965	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1464966	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1474435	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1474436	0.89[EUR][1000 genomes]
rs1474437	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1474438	0.89[EUR][1000 genomes]
rs1614200	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1622405	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1693492	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1693494	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1693497	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1693501	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1693502	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1693505	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1693506	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1693507	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1693508	0.81[EUR][1000 genomes]
rs1693510	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1693518	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1693522	0.84[EUR][1000 genomes]
rs1693525	0.82[EUR][1000 genomes]
rs1693526	0.82[EUR][1000 genomes]
rs1693527	0.82[EUR][1000 genomes]
rs1724578	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1724579	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1724588	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1724590	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1724595	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1724601	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1724603	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1724606	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1724608	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1724616	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1724637	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1724638	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17651212	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17651218	0.89[EUR][1000 genomes]
rs17651230	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17651242	0.89[EUR][1000 genomes]
rs17651397	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17651545	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17651581	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17651611	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17651623	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17651631	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17651692	0.97[EUR][1000 genomes]
rs17707651	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17707705	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17707729	0.89[EUR][1000 genomes]
rs17707912	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17707941	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17707984	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17707996	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1815175	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1815176	0.90[EUR][1000 genomes]
rs1869126	0.90[EUR][1000 genomes]
rs1869127	0.90[EUR][1000 genomes]
rs1869128	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2049519	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2049520	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2140962	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2177876	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2246134	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2257152	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2272283	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2414152	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2414155	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2462857	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2554888	0.80[EUR][1000 genomes]
rs2693462	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2693465	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2693466	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28422901	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs28519556	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs28680872	0.86[EUR][1000 genomes]
rs2899488	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2899489	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34003115	0.87[AMR][1000 genomes]
rs34099958	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34113113	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs34388417	0.85[EUR][1000 genomes]
rs36074938	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3764227	0.97[EUR][1000 genomes]
rs4528515	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4547284	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4774624	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4774625	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4774626	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4774627	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4776045	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4776048	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4776049	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4776050	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4776051	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4776053	0.85[EUR][1000 genomes]
rs4776054	0.97[EUR][1000 genomes]
rs55663209	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs55706220	0.92[EUR][1000 genomes]
rs55710656	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55722736	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs55774735	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55789576	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55842353	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55854724	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55856498	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55876643	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55914546	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55946989	0.97[EUR][1000 genomes]
rs56017964	0.97[EUR][1000 genomes]
rs56039749	0.92[EUR][1000 genomes]
rs56043792	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56066720	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56124629	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56128753	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs56147218	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56148029	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56205481	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56206042	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56227135	0.92[EUR][1000 genomes]
rs56271524	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56279946	0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs56315558	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56317843	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56332522	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs56360952	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56749732	0.92[EUR][1000 genomes]
rs56849428	0.97[EUR][1000 genomes]
rs56850880	0.92[EUR][1000 genomes]
rs57364199	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs57505385	0.89[EUR][1000 genomes]
rs57997370	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs58043289	0.89[EUR][1000 genomes]
rs58388195	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs58922508	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs59477983	0.96[EUR][1000 genomes]
rs60248452	0.92[EUR][1000 genomes]
rs60512163	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs60607997	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61494501	0.97[EUR][1000 genomes]
rs61617647	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6493561	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6493563	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs66461265	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs66674706	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs66755651	0.97[EUR][1000 genomes]
rs66870412	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs66920283	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67028104	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs67249415	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs67283829	0.92[EUR][1000 genomes]
rs67287941	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs67399033	0.92[EUR][1000 genomes]
rs67423475	0.97[EUR][1000 genomes]
rs67560989	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs67632670	0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67732354	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs67827251	0.97[EUR][1000 genomes]
rs67876506	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs68061874	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs68101123	0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7178839	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72623980	0.89[EUR][1000 genomes]
rs72623982	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72623984	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72623985	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72623986	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72623987	0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72623988	0.96[EUR][1000 genomes]
rs72736668	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs72736669	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs72736696	0.92[EUR][1000 genomes]
rs72736701	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72736702	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72738514	0.95[EUR][1000 genomes]
rs72738516	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7402901	0.91[EUR][1000 genomes]
rs8027927	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs8030731	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs940966	0.84[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs940967	0.86[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs940968	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs940971	0.90[EUR][1000 genomes]
rs940972	0.90[EUR][1000 genomes]
rs940973	0.90[EUR][1000 genomes]
rs9788691	0.97[EUR][1000 genomes]
rs9788777	0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471245	chr15:52607262-53187165	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
2	nsv1041421	chr15:52661342-53148286	Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
3	nsv1054899	chr15:52662365-52803756	Enhancers Genic enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
4	esv1832020	chr15:52702400-52901914	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs1001407	MYO5A	cis	Whole Blood	GTEx
rs1001407	ARPP-19	Cis_1M	lymphoblastoid	RTeQTL
rs1001407	MYO5A	Cis_1M	lymphoblastoid	RTeQTL
rs1001407	ARPP19	cis	Artery Tibial	GTEx

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:52774600-52802600	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr15:52775200-52788400	Weak transcription	Primary B cells from cord blood	blood
3	chr15:52776400-52789000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr15:52776400-52796200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr15:52776800-52788800	Weak transcription	Osteobl	bone
6	chr15:52778600-52786200	Weak transcription	Adipose Nuclei	Adipose
7	chr15:52778600-52786200	Weak transcription	A549	lung
8	chr15:52778600-52788600	Weak transcription	Psoas Muscle	Psoas
9	chr15:52778600-52788800	Weak transcription	HSMMtube	muscle
10	chr15:52778600-52812400	Weak transcription	Right Ventricle	heart
11	chr15:52779200-52791600	Weak transcription	Brain Cingulate Gyrus	brain
12	chr15:52780200-52784600	Weak transcription	Right Atrium	heart
13	chr15:52780200-52788400	Weak transcription	Left Ventricle	heart
14	chr15:52780200-52791800	Weak transcription	Brain Angular Gyrus	brain
15	chr15:52780800-52784400	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr15:52781400-52791000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr15:52781600-52788400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr15:52781800-52795200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
19	chr15:52782000-52785000	Weak transcription	Fetal Heart	heart
20	chr15:52782000-52787400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr15:52782200-52787400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr15:52782400-52795600	Weak transcription	Primary T helper cells PMA-I stimulated	--
23	chr15:52782600-52784400	Enhancers	Cortex derived primary cultured neurospheres	brain
24	chr15:52782600-52786200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr15:52782600-52788400	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr15:52782600-52796200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
27	chr15:52782800-52785200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr15:52783000-52784400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr15:52783000-52784600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr15:52783000-52786600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
31	chr15:52783000-52787000	Enhancers	Muscle Satellite Cultured Cells	--
32	chr15:52783000-52788400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
33	chr15:52783400-52785400	Enhancers	NHEK	skin
34	chr15:52783400-52786600	Enhancers	NHDF-Ad	bronchial
35	chr15:52783400-52786800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr15:52783600-52784800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
37	chr15:52783600-52785000	Enhancers	Brain Inferior Temporal Lobe	brain
38	chr15:52783800-52784400	Enhancers	HSMM	muscle
39	chr15:52783800-52784600	Enhancers	Breast Myoepithelial Primary Cells	Breast
40	chr15:52783800-52784600	Flanking Active TSS	HUVEC	blood vessel
41	chr15:52783800-52784800	Enhancers	Brain Anterior Caudate	brain
42	chr15:52783800-52784800	Enhancers	Colon Smooth Muscle	Colon
43	chr15:52783800-52785000	Enhancers	Brain Substantia Nigra	brain
44	chr15:52783800-52785200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr15:52783800-52785200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
46	chr15:52784000-52784600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr15:52784000-52786200	Weak transcription	Hela-S3	cervix
48	chr15:52784000-52786200	Weak transcription	HMEC	breast
49	chr15:52784000-52788800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr15:52784000-52788800	Weak transcription	NHLF	lung

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