Variant report

Variant rs1724616
Chromosome Location chr15:52759373-52759374
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52753600-52762600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
2 chr15:52755600-52759400 Enhancers Primary B cells from cord blood blood
3 chr15:52755800-52759400 Enhancers Primary B cells from peripheral blood blood
4 chr15:52756200-52759400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
5 chr15:52756800-52759400 Enhancers Primary T helper 17 cells PMA-I stimulated --
6 chr15:52757200-52770400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr15:52757400-52759400 Enhancers Primary monocytes fromperipheralblood blood
8 chr15:52757400-52759400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr15:52757400-52761200 Weak transcription NHLF lung
10 chr15:52757400-52771800 Weak transcription Primary T cells from cord blood blood
11 chr15:52758000-52759400 Enhancers HUES48 Cell Line embryonic stem cell
12 chr15:52758000-52759400 Enhancers HUES64 Cell Line embryonic stem cell
13 chr15:52758200-52759400 Enhancers H1 Cell Line embryonic stem cell
14 chr15:52758200-52759400 Enhancers H9 Cell Line embryonic stem cell
15 chr15:52758200-52761000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr15:52758400-52759400 Enhancers Brain Angular Gyrus brain
17 chr15:52758400-52759800 Enhancers Monocytes-CD14+_RO01746 blood
18 chr15:52758600-52772000 Weak transcription HUVEC blood vessel
19 chr15:52758600-52773000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr15:52758800-52760200 Enhancers iPS-15b Cell Line embryonic stem cell
21 chr15:52758800-52773000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr15:52759000-52759400 Enhancers HUES6 Cell Line embryonic stem cell
23 chr15:52759000-52762200 Weak transcription Psoas Muscle Psoas
24 chr15:52759000-52772000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr15:52759200-52759800 Weak transcription Primary T cells fromperipheralblood blood
26 chr15:52759200-52760000 Enhancers GM12878-XiMat blood
27 chr15:52759200-52760200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr15:52759200-52761600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr15:52759200-52761800 Weak transcription Brain Cingulate Gyrus brain
30 chr15:52759200-52762200 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr15:52759200-52763800 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr15:52759200-52770600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr15:52759200-52771000 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr15:52759200-52778200 Weak transcription Right Atrium heart

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