Variant report

Variant rs1693501
Chromosome Location chr15:52803756-52803757
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52778600-52812400 Weak transcription Right Ventricle heart
2 chr15:52786400-52812400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr15:52789600-52806600 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr15:52792000-52815200 Weak transcription NHLF lung
5 chr15:52796800-52811200 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr15:52796800-52819400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr15:52796800-52820000 Weak transcription Primary T cells from cord blood blood
8 chr15:52797000-52815200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr15:52797400-52810200 Weak transcription Primary B cells from cord blood blood
10 chr15:52797600-52819800 Weak transcription Primary T cells fromperipheralblood blood
11 chr15:52797800-52805800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr15:52798200-52805800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr15:52798800-52803800 Enhancers Brain Cingulate Gyrus brain
14 chr15:52799400-52804600 Enhancers Brain Angular Gyrus brain
15 chr15:52800200-52804000 Enhancers Brain Inferior Temporal Lobe brain
16 chr15:52800600-52803800 Enhancers Skeletal Muscle Male skeletal muscle
17 chr15:52800600-52804000 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr15:52800800-52803800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
19 chr15:52800800-52808600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr15:52801000-52808400 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr15:52801200-52804000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr15:52801400-52803800 Enhancers Brain Germinal Matrix brain
23 chr15:52801400-52804000 Enhancers Cortex derived primary cultured neurospheres brain
24 chr15:52801600-52803800 Enhancers Fetal Brain Female brain
25 chr15:52801600-52804000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr15:52801800-52810600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr15:52802000-52809600 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr15:52802400-52804000 Enhancers Brain Hippocampus Middle brain
29 chr15:52802400-52805200 Enhancers Brain Anterior Caudate brain
30 chr15:52802400-52808400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr15:52802400-52810800 Weak transcription HSMMtube muscle
32 chr15:52802600-52804000 Enhancers Sigmoid Colon Sigmoid Colon
33 chr15:52802800-52803800 Enhancers Colon Smooth Muscle Colon
34 chr15:52802800-52805600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr15:52802800-52809400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr15:52803000-52803800 Enhancers Brain Substantia Nigra brain
37 chr15:52803000-52803800 Enhancers Fetal Heart heart
38 chr15:52803000-52806600 Weak transcription Psoas Muscle Psoas
39 chr15:52803000-52807200 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr15:52803200-52803800 Enhancers Adipose Nuclei Adipose
41 chr15:52803200-52803800 Enhancers NHDF-Ad bronchial
42 chr15:52803200-52804000 Enhancers NHEK skin
43 chr15:52803400-52803800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr15:52803400-52804000 Enhancers iPS-15b Cell Line embryonic stem cell
45 chr15:52803400-52806600 Weak transcription Right Atrium heart
46 chr15:52803400-52812400 Weak transcription Left Ventricle heart
47 chr15:52803400-52812400 Weak transcription Spleen Spleen
48 chr15:52803600-52805000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr15:52803600-52806400 Weak transcription Skeletal Muscle Female skeletal muscle

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