Variant report

Variant rs17707996
Chromosome Location chr15:52778331-52778332
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52772200-52781600 Weak transcription Colonic Mucosa Colon
2 chr15:52774600-52778400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr15:52774600-52783800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr15:52774600-52802600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr15:52774800-52780000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr15:52774800-52783200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr15:52775200-52778400 Weak transcription Thymus Thymus
8 chr15:52775200-52788400 Weak transcription Primary B cells from cord blood blood
9 chr15:52776000-52780000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr15:52776000-52780600 Weak transcription Primary T cells from cord blood blood
11 chr15:52776000-52783800 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr15:52776200-52779000 Weak transcription Left Ventricle heart
13 chr15:52776200-52780000 Weak transcription Fetal Thymus thymus
14 chr15:52776200-52780400 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr15:52776400-52778400 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr15:52776400-52779000 Enhancers Muscle Satellite Cultured Cells --
17 chr15:52776400-52779400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr15:52776400-52779600 Weak transcription Primary B cells from peripheral blood blood
19 chr15:52776400-52780000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr15:52776400-52780000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr15:52776400-52780800 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr15:52776400-52789000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr15:52776400-52796200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr15:52776600-52778400 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr15:52776600-52779000 Weak transcription Colon Smooth Muscle Colon
26 chr15:52776600-52779000 Weak transcription GM12878-XiMat blood
27 chr15:52776600-52779600 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr15:52776600-52783800 Enhancers HUVEC blood vessel
29 chr15:52776800-52778600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr15:52776800-52778800 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr15:52776800-52788800 Weak transcription Osteobl bone
32 chr15:52777000-52778400 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr15:52777000-52779200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr15:52777000-52780000 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr15:52777000-52783400 Weak transcription NHDF-Ad bronchial
36 chr15:52777200-52778400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr15:52777200-52779400 Weak transcription Primary T cells fromperipheralblood blood
38 chr15:52777200-52779800 Weak transcription Primary monocytes fromperipheralblood blood
39 chr15:52777600-52779400 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr15:52777600-52780000 Enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr15:52777800-52778400 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr15:52777800-52778400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr15:52778000-52778600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
44 chr15:52778000-52778600 Enhancers A549 lung
45 chr15:52778000-52778600 Enhancers HepG2 liver
46 chr15:52778000-52779000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr15:52778000-52779200 Enhancers HUES6 Cell Line embryonic stem cell
48 chr15:52778000-52779200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr15:52778000-52781200 Enhancers Brain Substantia Nigra brain
50 chr15:52778000-52781400 Enhancers Brain Anterior Caudate brain

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