Variant report

Variant rs2462857
Chromosome Location chr15:52776901-52776902
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52759200-52778200 Weak transcription Right Atrium heart
2 chr15:52770000-52777000 Enhancers Primary T helper 17 cells PMA-I stimulated --
3 chr15:52771000-52777000 Enhancers Primary T regulatory cells fromperipheralblood blood
4 chr15:52771000-52778000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr15:52772000-52777000 Enhancers Primary T helper cells fromperipheralblood blood
6 chr15:52772000-52777000 Enhancers NHDF-Ad bronchial
7 chr15:52772200-52781600 Weak transcription Colonic Mucosa Colon
8 chr15:52772600-52777200 Enhancers Primary monocytes fromperipheralblood blood
9 chr15:52772600-52777200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
10 chr15:52773000-52777000 Enhancers NHEK skin
11 chr15:52774400-52777000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr15:52774600-52777000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
13 chr15:52774600-52777000 Enhancers Monocytes-CD14+_RO01746 blood
14 chr15:52774600-52777200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr15:52774600-52778200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr15:52774600-52778400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr15:52774600-52783800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr15:52774600-52802600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr15:52774800-52778200 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr15:52774800-52780000 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr15:52774800-52783200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr15:52775200-52778000 Weak transcription Brain Substantia Nigra brain
23 chr15:52775200-52778200 Weak transcription Brain Angular Gyrus brain
24 chr15:52775200-52778400 Weak transcription Thymus Thymus
25 chr15:52775200-52788400 Weak transcription Primary B cells from cord blood blood
26 chr15:52775400-52777800 Weak transcription Brain Inferior Temporal Lobe brain
27 chr15:52776000-52777200 Enhancers HSMM muscle
28 chr15:52776000-52777800 Weak transcription Brain Hippocampus Middle brain
29 chr15:52776000-52780000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr15:52776000-52780600 Weak transcription Primary T cells from cord blood blood
31 chr15:52776000-52783800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr15:52776200-52779000 Weak transcription Left Ventricle heart
33 chr15:52776200-52780000 Weak transcription Fetal Thymus thymus
34 chr15:52776200-52780400 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr15:52776400-52777000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr15:52776400-52777600 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr15:52776400-52778400 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr15:52776400-52779000 Enhancers Muscle Satellite Cultured Cells --
39 chr15:52776400-52779400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr15:52776400-52779600 Weak transcription Primary B cells from peripheral blood blood
41 chr15:52776400-52780000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr15:52776400-52780000 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr15:52776400-52780800 Weak transcription Duodenum Smooth Muscle Duodenum
44 chr15:52776400-52789000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr15:52776400-52796200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr15:52776600-52777000 Weak transcription Primary T cells fromperipheralblood blood
47 chr15:52776600-52777600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr15:52776600-52777600 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr15:52776600-52777600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr15:52776600-52777600 Weak transcription Fetal Heart heart

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