The 2.0 version of rSNPBase

Variant report

Variant rs10041715
Chromosome Location chr5:96882369-96882370
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96878800-96882800 Weak transcription Fetal Intestine Large intestine
2 chr5:96880200-96883000 Weak transcription Duodenum Mucosa Duodenum
3 chr5:96880400-96882400 Enhancers HUES64 Cell Line embryonic stem cell
4 chr5:96880400-96886000 Enhancers Fetal Intestine Small intestine
5 chr5:96880600-96884400 Enhancers NHDF-Ad bronchial
6 chr5:96880600-96885600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr5:96880600-96885800 Weak transcription Muscle Satellite Cultured Cells --
8 chr5:96880800-96884400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr5:96880800-96886000 Enhancers HUVEC blood vessel
10 chr5:96881000-96887200 Enhancers Primary T cells from cord blood blood
11 chr5:96881000-96890000 Weak transcription Fetal Muscle Leg muscle
12 chr5:96881200-96884000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr5:96881200-96884400 Enhancers Primary hematopoietic stem cells blood
14 chr5:96881200-96884800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr5:96881400-96884800 Enhancers Primary T regulatory cells fromperipheralblood blood
16 chr5:96881800-96883200 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr5:96881800-96883200 Weak transcription Small Intestine intestine
18 chr5:96881800-96883800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr5:96881800-96884400 Enhancers Breast Myoepithelial Primary Cells Breast
20 chr5:96882000-96882600 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr5:96882000-96883000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr5:96882000-96883000 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr5:96882000-96883200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr5:96882000-96883200 Weak transcription Brain Substantia Nigra brain
25 chr5:96882000-96884800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr5:96882000-96884800 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr5:96882000-96885200 Weak transcription Brain Inferior Temporal Lobe brain
28 chr5:96882000-96885400 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr5:96882000-96885400 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr5:96882000-96885600 Weak transcription Brain Anterior Caudate brain
31 chr5:96882000-96885600 Weak transcription Brain Cingulate Gyrus brain
32 chr5:96882000-96885800 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr5:96882000-96885800 Weak transcription Osteobl bone
34 chr5:96882000-96889400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr5:96882200-96883200 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr5:96882200-96883400 Weak transcription Primary B cells from peripheral blood blood
37 chr5:96882200-96883800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr5:96882200-96884000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr5:96882200-96885200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr5:96882200-96885200 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr5:96882200-96885400 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr5:96882200-96885600 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr5:96882200-96885600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015