Variant report

Variant rs12653090
Chromosome Location chr5:96886606-96886607
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96881000-96887200 Enhancers Primary T cells from cord blood blood
2 chr5:96881000-96890000 Weak transcription Fetal Muscle Leg muscle
3 chr5:96882000-96889400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr5:96884400-96890400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr5:96884800-96889600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr5:96885200-96887800 Enhancers Primary T regulatory cells fromperipheralblood blood
7 chr5:96885400-96886800 Enhancers Cortex derived primary cultured neurospheres brain
8 chr5:96885600-96886800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr5:96885600-96886800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
10 chr5:96885600-96886800 Enhancers Brain Germinal Matrix brain
11 chr5:96886000-96886800 Enhancers Fetal Intestine Large intestine
12 chr5:96886000-96889400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr5:96886200-96889600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr5:96886200-96889800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr5:96886400-96886800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr5:96886400-96886800 Enhancers Duodenum Mucosa Duodenum
17 chr5:96886400-96887000 Enhancers Brain Substantia Nigra brain
18 chr5:96886400-96889400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr5:96886400-96889400 Weak transcription HSMM muscle
20 chr5:96886400-96889800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr5:96886400-96889800 Weak transcription Muscle Satellite Cultured Cells --
22 chr5:96886400-96889800 Weak transcription NHEK skin
23 chr5:96886400-96889800 Weak transcription Osteobl bone
24 chr5:96886400-96890000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr5:96886600-96889200 Weak transcription NHDF-Ad bronchial
26 chr5:96886600-96889400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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