Variant report

Variant rs12653533
Chromosome Location chr5:96886580-96886581
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96881000-96887200 Enhancers Primary T cells from cord blood blood
2 chr5:96881000-96890000 Weak transcription Fetal Muscle Leg muscle
3 chr5:96882000-96889400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr5:96884400-96890400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr5:96884800-96889600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr5:96885200-96886600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr5:96885200-96886600 Enhancers HUES64 Cell Line embryonic stem cell
8 chr5:96885200-96887800 Enhancers Primary T regulatory cells fromperipheralblood blood
9 chr5:96885400-96886600 Enhancers HUES6 Cell Line embryonic stem cell
10 chr5:96885400-96886600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr5:96885400-96886600 Enhancers Brain Hippocampus Middle brain
12 chr5:96885400-96886800 Enhancers Cortex derived primary cultured neurospheres brain
13 chr5:96885600-96886600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr5:96885600-96886600 Enhancers Brain Cingulate Gyrus brain
15 chr5:96885600-96886800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr5:96885600-96886800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:96885600-96886800 Enhancers Brain Germinal Matrix brain
18 chr5:96885800-96886600 Enhancers NHDF-Ad bronchial
19 chr5:96886000-96886800 Enhancers Fetal Intestine Large intestine
20 chr5:96886000-96889400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr5:96886200-96889600 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr5:96886200-96889800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr5:96886400-96886800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr5:96886400-96886800 Enhancers Duodenum Mucosa Duodenum
25 chr5:96886400-96887000 Enhancers Brain Substantia Nigra brain
26 chr5:96886400-96889400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr5:96886400-96889400 Weak transcription HSMM muscle
28 chr5:96886400-96889800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr5:96886400-96889800 Weak transcription Muscle Satellite Cultured Cells --
30 chr5:96886400-96889800 Weak transcription NHEK skin
31 chr5:96886400-96889800 Weak transcription Osteobl bone
32 chr5:96886400-96890000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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