Variant report

Variant rs12153708
Chromosome Location chr5:96883695-96883696
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96880400-96886000 Enhancers Fetal Intestine Small intestine
2 chr5:96880600-96884400 Enhancers NHDF-Ad bronchial
3 chr5:96880600-96885600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr5:96880600-96885800 Weak transcription Muscle Satellite Cultured Cells --
5 chr5:96880800-96884400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr5:96880800-96886000 Enhancers HUVEC blood vessel
7 chr5:96881000-96887200 Enhancers Primary T cells from cord blood blood
8 chr5:96881000-96890000 Weak transcription Fetal Muscle Leg muscle
9 chr5:96881200-96884000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr5:96881200-96884400 Enhancers Primary hematopoietic stem cells blood
11 chr5:96881200-96884800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr5:96881400-96884800 Enhancers Primary T regulatory cells fromperipheralblood blood
13 chr5:96881800-96883800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr5:96881800-96884400 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr5:96882000-96884800 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr5:96882000-96884800 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr5:96882000-96885200 Weak transcription Brain Inferior Temporal Lobe brain
18 chr5:96882000-96885400 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr5:96882000-96885400 Weak transcription iPS-20b Cell Line embryonic stem cell
20 chr5:96882000-96885600 Weak transcription Brain Anterior Caudate brain
21 chr5:96882000-96885600 Weak transcription Brain Cingulate Gyrus brain
22 chr5:96882000-96885800 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr5:96882000-96885800 Weak transcription Osteobl bone
24 chr5:96882000-96889400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr5:96882200-96883800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr5:96882200-96884000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr5:96882200-96885200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr5:96882200-96885200 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr5:96882200-96885400 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr5:96882200-96885600 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr5:96882200-96885600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr5:96882400-96885200 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr5:96882600-96884600 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr5:96882800-96885000 Enhancers Fetal Intestine Large intestine
35 chr5:96883000-96884200 Enhancers Rectal Mucosa Donor 29 rectum
36 chr5:96883000-96884400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr5:96883000-96884400 Enhancers Duodenum Mucosa Duodenum
38 chr5:96883200-96884000 Enhancers Primary hematopoietic stem cells short term culture blood
39 chr5:96883200-96884000 Enhancers GM12878-XiMat blood
40 chr5:96883200-96884400 Enhancers Primary T helper cells fromperipheralblood blood
41 chr5:96883200-96884400 Enhancers Primary Natural Killer cells fromperipheralblood blood
42 chr5:96883200-96884400 Enhancers Small Intestine intestine
43 chr5:96883200-96884400 Enhancers Dnd41 blood
44 chr5:96883200-96884600 Enhancers Primary monocytes fromperipheralblood blood
45 chr5:96883200-96884800 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr5:96883400-96883800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr5:96883400-96884200 Weak transcription Primary T killer naive cells fromperipheralblood blood
48 chr5:96883400-96884400 Enhancers Primary B cells from peripheral blood blood
49 chr5:96883400-96884400 Enhancers Primary T helper cells PMA-I stimulated --
50 chr5:96883400-96884400 Enhancers Rectal Mucosa Donor 31 rectum

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