Variant report

Variant	rs10079365
Chromosome Location	chr5:35469622-35469623
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10053766	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10071128	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10213837	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1396386	0.82[EUR][1000 genomes]
rs17252095	0.84[EUR][1000 genomes]
rs17252130	0.84[EUR][1000 genomes]
rs17252290	0.84[EUR][1000 genomes]
rs2397845	0.96[ASN][1000 genomes]
rs2397846	0.96[ASN][1000 genomes]
rs34228457	0.88[ASN][1000 genomes]
rs60775377	0.89[EUR][1000 genomes]
rs764912	1.00[CHB][hapmap]
rs984638	0.96[ASN][1000 genomes]
rs987803	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018541	chr5:35446209-35491185	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1030395	chr5:35446516-35491185	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35468000-35470400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr5:35468800-35471400	Enhancers	Placenta	Placenta
3	chr5:35469000-35470400	Weak transcription	HepG2	liver
4	chr5:35469200-35479400	Weak transcription	Pancreas	Pancrea

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links