Variant report
| Variant | rs10086033 |
|---|---|
| Chromosome Location | chr8:91563670-91563671 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:4)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:4 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr8:91562313..91566164-chr8:91571290..91573705,3 | K562 | blood: | |
| 2 | chr8:91562570..91565542-chr8:91566212..91568205,2 | MCF-7 | breast: | |
| 3 | chr8:91561004..91562636-chr8:91562802..91565728,2 | K562 | blood: | |
| 4 | chr8:91563492..91566164-chr8:91571290..91573705,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:31)
| rs_ID | r2[population] |
|---|---|
| rs10046627 | 1.00[EUR][1000 genomes] |
| rs10046646 | 1.00[EUR][1000 genomes] |
| rs10046669 | 1.00[EUR][1000 genomes] |
| rs10094247 | 1.00[EUR][1000 genomes] |
| rs10102958 | 0.86[EUR][1000 genomes] |
| rs10103105 | 1.00[EUR][1000 genomes] |
| rs10103492 | 1.00[EUR][1000 genomes] |
| rs10107291 | 1.00[EUR][1000 genomes] |
| rs10110208 | 1.00[EUR][1000 genomes] |
| rs10113814 | 1.00[EUR][1000 genomes] |
| rs10504895 | 1.00[EUR][1000 genomes] |
| rs11995911 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs11996705 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs16904875 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs16904876 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs17642418 | 1.00[EUR][1000 genomes] |
| rs17713849 | 1.00[EUR][1000 genomes] |
| rs17714516 | 1.00[EUR][1000 genomes] |
| rs17714893 | 1.00[EUR][1000 genomes] |
| rs28409887 | 0.86[EUR][1000 genomes] |
| rs28470383 | 0.86[EUR][1000 genomes] |
| rs28497331 | 1.00[EUR][1000 genomes] |
| rs28501669 | 1.00[EUR][1000 genomes] |
| rs28635869 | 1.00[EUR][1000 genomes] |
| rs28703980 | 1.00[EUR][1000 genomes] |
| rs28707372 | 1.00[EUR][1000 genomes] |
| rs28832707 | 0.86[EUR][1000 genomes] |
| rs41428044 | 1.00[EUR][1000 genomes] |
| rs4570116 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs5005584 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73697736 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:91558000-91563800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
