Variant report

Variant	rs10103105
Chromosome Location	chr8:91549288-91549289
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:91544462..91546603-chr8:91546788..91549297,3	MCF-7	breast:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10046627	1.00[EUR][1000 genomes]
rs10046646	1.00[EUR][1000 genomes]
rs10046669	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10086033	1.00[EUR][1000 genomes]
rs10094247	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10102958	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10103492	1.00[EUR][1000 genomes]
rs10107291	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10110208	1.00[EUR][1000 genomes]
rs10113814	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10504895	1.00[EUR][1000 genomes]
rs11995911	1.00[EUR][1000 genomes]
rs11996705	1.00[EUR][1000 genomes]
rs16904875	1.00[EUR][1000 genomes]
rs16904876	1.00[EUR][1000 genomes]
rs17642418	1.00[EUR][1000 genomes]
rs17713849	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17714516	1.00[EUR][1000 genomes]
rs17714893	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28409887	0.86[EUR][1000 genomes]
rs28470383	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs28497331	1.00[EUR][1000 genomes]
rs28501669	1.00[EUR][1000 genomes]
rs28635869	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28703980	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28707372	1.00[EUR][1000 genomes]
rs28832707	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs41428044	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4570116	1.00[EUR][1000 genomes]
rs5005584	1.00[EUR][1000 genomes]
rs73697736	1.00[EUR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91544800-91552400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr8:91545400-91550000	Enhancers	HSMM	muscle
3	chr8:91545600-91550000	Enhancers	NHEK	skin
4	chr8:91545800-91549600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:91545800-91550000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr8:91545800-91550000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr8:91545800-91550000	Enhancers	Placenta Amnion	Placenta Amnion
8	chr8:91545800-91550000	Enhancers	HMEC	breast
9	chr8:91546800-91552800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr8:91547000-91552600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr8:91547000-91557400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr8:91547600-91549600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr8:91547800-91549600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr8:91548000-91549600	Enhancers	Muscle Satellite Cultured Cells	--
15	chr8:91548000-91549800	Enhancers	HUVEC	blood vessel
16	chr8:91548200-91549600	Enhancers	NH-A	brain
17	chr8:91548200-91549600	Enhancers	Osteobl	bone
18	chr8:91548600-91549600	Enhancers	Hela-S3	cervix
19	chr8:91548600-91551200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr8:91548800-91549400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr8:91548800-91549400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr8:91548800-91549400	Enhancers	HSMMtube	muscle
23	chr8:91548800-91549400	Enhancers	NHLF	lung
24	chr8:91549200-91549400	Enhancers	NHDF-Ad	bronchial

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