Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10091688	1.00[EUR][1000 genomes]
rs10093753	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs10095531	1.00[EUR][1000 genomes]
rs10096043	1.00[EUR][1000 genomes]
rs10099780	1.00[EUR][1000 genomes]
rs10106062	1.00[EUR][1000 genomes]
rs10107052	1.00[EUR][1000 genomes]
rs10108405	1.00[EUR][1000 genomes]
rs10110227	1.00[EUR][1000 genomes]
rs10113256	1.00[EUR][1000 genomes]
rs13439700	1.00[EUR][1000 genomes]
rs16932452	1.00[TSI][hapmap]
rs28364014	1.00[EUR][1000 genomes]
rs28482448	1.00[EUR][1000 genomes]
rs28577932	1.00[EUR][1000 genomes]
rs28623751	1.00[EUR][1000 genomes]
rs28690794	1.00[EUR][1000 genomes]
rs28702525	1.00[EUR][1000 genomes]
rs28705810	1.00[EUR][1000 genomes]
rs28770228	1.00[EUR][1000 genomes]
rs28855126	1.00[EUR][1000 genomes]
rs28871963	1.00[EUR][1000 genomes]
rs28873428	1.00[EUR][1000 genomes]
rs57754344	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7003229	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73244947	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67097800-67100000	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr8:67098000-67100000	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr8:67098000-67100000	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr8:67098200-67099400	Enhancers	H1 Cell Line	embryonic stem cell
5	chr8:67098200-67099600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr8:67098200-67100200	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr8:67098400-67099400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr8:67098400-67100200	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr8:67098600-67099600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr8:67098800-67102000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr8:67098800-67103800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr8:67099000-67099400	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr8:67099200-67100200	Enhancers	iPS-20b Cell Line	embryonic stem cell

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