Variant report

Variant	rs10101581
Chromosome Location	chr8:126550062-126550063
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10097356	1.00[AMR][1000 genomes]
rs10105848	1.00[AMR][1000 genomes]
rs10106819	1.00[AMR][1000 genomes]
rs10106935	1.00[AMR][1000 genomes]
rs10106950	1.00[AMR][1000 genomes]
rs10109000	1.00[AMR][1000 genomes]
rs10111309	1.00[AMR][1000 genomes]
rs28421051	1.00[AMR][1000 genomes]
rs28422055	1.00[AMR][1000 genomes]
rs7005006	1.00[AMR][1000 genomes]
rs73704998	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126544600-126551000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:126548600-126555800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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