Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10116111	0.81[CHD][hapmap]
rs10116635	0.93[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap]
rs10118203	1.00[CEU][hapmap];0.88[CHB][hapmap];0.95[JPT][hapmap]
rs10759052	1.00[CHB][hapmap]
rs10816064	0.81[CHB][hapmap];0.84[JPT][hapmap]
rs10816066	0.81[CHB][hapmap];0.84[JPT][hapmap]
rs10816067	0.81[CHB][hapmap];0.84[JPT][hapmap]
rs10816068	0.81[CHB][hapmap]
rs10816071	0.88[CHB][hapmap];0.89[JPT][hapmap]
rs10816074	0.94[CHB][hapmap]
rs10816075	0.85[CEU][hapmap];0.94[CHB][hapmap]
rs10977651	0.83[CHD][hapmap]
rs1333105	0.83[CHB][hapmap]
rs1889105	0.81[CHB][hapmap]
rs4146137	0.88[CHB][hapmap]
rs4297075	0.94[CHB][hapmap]
rs4319157	0.81[CHB][hapmap]
rs4357351	0.81[CHB][hapmap];0.84[CHD][hapmap];0.90[JPT][hapmap]
rs4568657	0.94[CHB][hapmap]
rs6415799	0.81[CHB][hapmap]
rs7042564	0.83[CHB][hapmap]
rs7872553	0.94[CHB][hapmap];0.98[CHD][hapmap];0.89[GIH][hapmap];0.89[JPT][hapmap];0.85[MEX][hapmap]
rs7874373	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498066	chr9:8961722-9486652	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv892249	chr9:9026854-9377679	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv831505	chr9:9072216-9277320	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv892252	chr9:9164473-9476425	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	nsv1027042	chr9:9208635-9300048	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
6	nsv1021440	chr9:9231961-9329870	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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