Variant report

Variant	rs10120740
Chromosome Location	chr9:92743979-92743980
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10117261	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10118552	0.84[ASN][1000 genomes]
rs10123198	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10821501	0.84[ASN][1000 genomes]
rs10993699	0.84[ASN][1000 genomes]
rs1443364	0.83[ASN][1000 genomes]
rs1999100	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6479520	0.82[EUR][1000 genomes]
rs6479580	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7021679	0.84[ASN][1000 genomes]
rs7026182	0.81[EUR][1000 genomes]
rs7030189	0.83[EUR][1000 genomes]
rs7035196	0.90[EUR][1000 genomes]
rs7038428	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs721833	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7866392	0.84[ASN][1000 genomes]
rs7874166	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893561	chr9:92732368-92802101	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92740800-92744200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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