Variant report

Variant	rs6479580
Chromosome Location	chr9:92728388-92728389
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10117261	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10118552	0.81[ASN][1000 genomes]
rs10120740	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10123198	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10821501	0.81[ASN][1000 genomes]
rs10993699	0.81[ASN][1000 genomes]
rs1443364	0.80[ASN][1000 genomes]
rs1999100	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6479520	0.87[EUR][1000 genomes]
rs7021679	0.81[ASN][1000 genomes]
rs7026182	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7030189	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7035196	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7038428	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs721833	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7866392	0.81[ASN][1000 genomes]
rs7874166	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92724800-92729800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr9:92724800-92732400	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr9:92725000-92729600	Weak transcription	Fetal Intestine Small	intestine
4	chr9:92725400-92731000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr9:92725600-92738200	Weak transcription	Lung	lung
6	chr9:92727400-92732800	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr9:92727800-92728600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr9:92727800-92731600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr9:92727800-92731600	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr9:92727800-92731800	Weak transcription	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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