Variant report

Variant	rs10132033
Chromosome Location	chr14:65023570-65023571
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10130241	0.92[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs10130755	0.92[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs10132794	0.88[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs10142343	0.82[ASN][1000 genomes]
rs10142536	0.86[ASN][1000 genomes]
rs10144661	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10145844	0.90[EUR][1000 genomes]
rs10150987	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10151434	0.82[ASN][1000 genomes]
rs10151970	0.82[ASN][1000 genomes]
rs11850291	0.81[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs12588437	0.88[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs12588509	0.88[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs61987034	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61987035	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61987036	0.95[EUR][1000 genomes]
rs7149587	0.82[ASN][1000 genomes]
rs7160131	0.86[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10132033	ZBTB25	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65017400-65027800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:65021400-65033400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:65021600-65047600	Weak transcription	Pancreas	Pancrea
4	chr14:65023000-65023800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:65023200-65023800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr14:65023200-65023800	Enhancers	NHLF	lung
7	chr14:65023400-65023800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr14:65023400-65033400	Weak transcription	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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