The 2.0 version of rSNPBase

Variant report

Variant rs10132356
Chromosome Location chr14:55358247-55358248
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55345400-55368200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr14:55348400-55368200 Weak transcription Gastric stomach
3 chr14:55349000-55366400 Weak transcription Hela-S3 cervix
4 chr14:55349200-55358400 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr14:55349200-55367400 Weak transcription Fetal Intestine Large intestine
6 chr14:55349200-55367400 Weak transcription Thymus Thymus
7 chr14:55349400-55367800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr14:55349600-55367200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr14:55349600-55368000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr14:55350000-55366400 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr14:55353600-55365800 Weak transcription Primary T cells fromperipheralblood blood
12 chr14:55354000-55367200 Weak transcription Primary T cells from cord blood blood
13 chr14:55355000-55358400 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr14:55355200-55358400 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr14:55355200-55358400 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr14:55355200-55360400 Weak transcription HMEC breast
17 chr14:55355200-55362000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr14:55355600-55359000 Enhancers Primary monocytes fromperipheralblood blood
19 chr14:55355600-55359400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr14:55355600-55360000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr14:55355800-55358400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr14:55355800-55359800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr14:55356000-55358400 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr14:55356000-55362000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr14:55356000-55362000 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr14:55356000-55362000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr14:55356000-55362600 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr14:55356000-55368000 Weak transcription Spleen Spleen
29 chr14:55356200-55358400 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr14:55356400-55358600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr14:55356400-55362200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr14:55356400-55362400 Weak transcription Lung lung
33 chr14:55356400-55365600 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr14:55356400-55368000 Weak transcription Small Intestine intestine
35 chr14:55356600-55358400 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr14:55356600-55367800 Weak transcription K562 blood
37 chr14:55356800-55358400 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr14:55356800-55360000 Weak transcription ES-WA7 Cell Line embryonic stem cell
39 chr14:55356800-55360000 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr14:55356800-55360200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr14:55356800-55364200 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr14:55356800-55365400 Weak transcription Fetal Intestine Small intestine
43 chr14:55357000-55361800 Weak transcription NHEK skin
44 chr14:55357200-55359000 Enhancers Monocytes-CD14+_RO01746 blood
45 chr14:55357400-55361000 Weak transcription HepG2 liver
46 chr14:55357600-55362200 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr14:55357800-55358400 Enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr14:55358000-55360000 Weak transcription Primary B cells from peripheral blood blood
49 chr14:55358200-55358400 Flanking Active TSS GM12878-XiMat blood
50 chr14:55358200-55358600 Enhancers H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015