The 2.0 version of rSNPBase

Variant report

Variant rs28643468
Chromosome Location chr14:55333358-55333359
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55303400-55337000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr14:55305200-55337200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr14:55306200-55337000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr14:55306400-55336800 Weak transcription Dnd41 blood
5 chr14:55306600-55336600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr14:55306800-55337000 Weak transcription Brain Anterior Caudate brain
7 chr14:55308000-55336600 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr14:55311800-55337000 Weak transcription Fetal Intestine Large intestine
9 chr14:55321000-55337000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr14:55321200-55337000 Weak transcription H1 Cell Line embryonic stem cell
11 chr14:55324400-55334000 Weak transcription Fetal Muscle Trunk muscle
12 chr14:55324800-55337000 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr14:55325000-55337200 Weak transcription Adipose Nuclei Adipose
14 chr14:55326200-55333400 Weak transcription GM12878-XiMat blood
15 chr14:55326200-55336400 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr14:55326600-55336600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr14:55327000-55336000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr14:55327000-55336400 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr14:55327000-55338200 Weak transcription Primary B cells from peripheral blood blood
20 chr14:55327200-55336600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr14:55327200-55336600 Weak transcription Duodenum Mucosa Duodenum
22 chr14:55329400-55337000 Weak transcription Fetal Intestine Small intestine
23 chr14:55329400-55347800 Weak transcription Primary B cells from cord blood blood
24 chr14:55329600-55337200 Weak transcription Stomach Mucosa stomach
25 chr14:55330600-55333400 Weak transcription Primary T cells from cord blood blood
26 chr14:55330800-55337200 Weak transcription Aorta Aorta
27 chr14:55330800-55347800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr14:55331200-55333600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr14:55331200-55333600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr14:55331200-55333800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr14:55331400-55336600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr14:55331400-55336600 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr14:55331400-55337000 Weak transcription Primary T cells fromperipheralblood blood
34 chr14:55331600-55333400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr14:55331600-55336200 Weak transcription Hela-S3 cervix
36 chr14:55331600-55336400 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr14:55331600-55337200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr14:55331800-55333400 Weak transcription HSMMtube muscle
39 chr14:55331800-55334200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr14:55331800-55344800 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr14:55331800-55347600 Weak transcription Primary monocytes fromperipheralblood blood
42 chr14:55332000-55333400 Enhancers Liver Liver
43 chr14:55332400-55333800 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr14:55332400-55333800 Enhancers Fetal Lung lung
45 chr14:55332400-55334000 Enhancers Pancreatic Islets Pancreatic Islet
46 chr14:55332400-55334200 Enhancers Osteobl bone
47 chr14:55332600-55334000 Enhancers Primary T helper cells PMA-I stimulated --
48 chr14:55332800-55333400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr14:55332800-55333400 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr14:55332800-55333400 Enhancers Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015