Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10129556	1.00[ASN][1000 genomes]
rs10132092	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10132409	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10138306	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10138490	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10141508	1.00[ASN][1000 genomes]
rs10142492	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10144113	1.00[ASN][1000 genomes]
rs10149250	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs10149514	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11623870	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13379335	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17110647	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17110653	1.00[ASN][1000 genomes]
rs28421222	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28756816	1.00[ASN][1000 genomes]
rs58477989	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58744906	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61991560	1.00[ASN][1000 genomes]
rs73338959	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902113	chr14:80172094-80929699	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10136149	C14orf145	cis	multi-tissue	Pritchard

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:80885600-80886800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr14:80885600-80886800	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr14:80886200-80886800	Enhancers	Psoas Muscle	Psoas

Quick Search: