Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10129556	1.00[ASN][1000 genomes]
rs10132092	1.00[ASN][1000 genomes]
rs10132409	1.00[ASN][1000 genomes]
rs10136149	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10138306	1.00[ASN][1000 genomes]
rs10138490	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10141508	1.00[ASN][1000 genomes]
rs10142492	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10144113	1.00[ASN][1000 genomes]
rs10149250	1.00[ASN][1000 genomes]
rs10149514	1.00[ASN][1000 genomes]
rs13379335	1.00[ASN][1000 genomes]
rs17110647	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17110653	0.92[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs28421222	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28756816	1.00[ASN][1000 genomes]
rs58477989	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58744906	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61991560	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73338959	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902113	chr14:80172094-80929699	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:80891400-80892400	Enhancers	A549	lung
2	chr14:80891400-80893800	Enhancers	NHEK	skin
3	chr14:80891400-80894400	Enhancers	Hela-S3	cervix
4	chr14:80891600-80892400	Enhancers	Osteobl	bone
5	chr14:80891600-80892600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr14:80891600-80892800	Enhancers	NHDF-Ad	bronchial
7	chr14:80891600-80893000	Enhancers	HMEC	breast
8	chr14:80891600-80893200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr14:80891600-80893200	Enhancers	HUVEC	blood vessel
10	chr14:80891600-80893800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr14:80891600-80893800	Enhancers	NH-A	brain
12	chr14:80891800-80892800	Enhancers	HSMM	muscle
13	chr14:80891800-80893600	Enhancers	Muscle Satellite Cultured Cells	--
14	chr14:80891800-80893800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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