Variant report

Variant	rs10222473
Chromosome Location	chr3:100169522-100169523
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10049208	1.00[EUR][1000 genomes]
rs10451918	1.00[CEU][hapmap]
rs1144116	1.00[CEU][hapmap]
rs1144117	1.00[CEU][hapmap]
rs1144119	1.00[CEU][hapmap]
rs13318574	1.00[EUR][1000 genomes]
rs13326259	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16842034	0.83[EUR][1000 genomes]
rs2289508	1.00[CEU][hapmap];0.86[EUR][1000 genomes]
rs28631346	0.86[EUR][1000 genomes]
rs28655373	1.00[EUR][1000 genomes]
rs41272629	0.83[EUR][1000 genomes]
rs41272631	0.83[EUR][1000 genomes]
rs41272633	0.83[EUR][1000 genomes]
rs62636640	0.83[EUR][1000 genomes]
rs62636641	0.83[EUR][1000 genomes]
rs6768684	0.83[EUR][1000 genomes]
rs72943302	0.86[EUR][1000 genomes]
rs72945203	0.86[EUR][1000 genomes]
rs73860636	1.00[EUR][1000 genomes]
rs7433331	1.00[CEU][hapmap]
rs7637142	1.00[EUR][1000 genomes]
rs7652596	0.83[EUR][1000 genomes]
rs9653957	0.86[EUR][1000 genomes]
rs9809742	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9817778	1.00[CEU][hapmap]
rs9821113	0.86[EUR][1000 genomes]
rs9844356	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9855368	1.00[EUR][1000 genomes]
rs9864923	0.86[EUR][1000 genomes]
rs9867520	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs9867888	1.00[CEU][hapmap]
rs9871870	1.00[EUR][1000 genomes]
rs9872028	1.00[EUR][1000 genomes]
rs9876856	1.00[CEU][hapmap];1.00[EUR][1000 genomes]

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100144200-100175600	Weak transcription	Psoas Muscle	Psoas
2	chr3:100146400-100177800	Weak transcription	Ovary	ovary
3	chr3:100148200-100182400	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr3:100149400-100171800	Weak transcription	Aorta	Aorta
5	chr3:100158400-100176400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr3:100161000-100169600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr3:100163000-100177200	Weak transcription	HepG2	liver
8	chr3:100163400-100176400	Weak transcription	Fetal Lung	lung
9	chr3:100166800-100173600	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr3:100167600-100170800	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr3:100167600-100171000	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr3:100168000-100171200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr3:100168400-100170600	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr3:100168600-100170400	Weak transcription	Duodenum Smooth Muscle	Duodenum
15	chr3:100168600-100176200	Weak transcription	Brain Angular Gyrus	brain
16	chr3:100168800-100171600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr3:100168800-100174000	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr3:100168800-100175600	Weak transcription	Brain Germinal Matrix	brain
19	chr3:100168800-100177800	Weak transcription	Left Ventricle	heart
20	chr3:100169000-100170600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr3:100169000-100171800	Weak transcription	Liver	Liver
22	chr3:100169200-100171200	Weak transcription	Fetal Stomach	stomach
23	chr3:100169400-100170600	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr3:100169400-100170800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
25	chr3:100169400-100175600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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