Variant report

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ARF5-15	chr7:126655663-126657210	ucscGeneNc_uc003vlv_2

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10233335	1.00[YRI][hapmap]
rs10242944	1.00[CEU][hapmap]
rs11563409	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11563511	1.00[CEU][hapmap]
rs11563735	1.00[CEU][hapmap]
rs11563777	0.90[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11563780	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11563793	1.00[CEU][hapmap]
rs17863182	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17863188	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17864102	1.00[CEU][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17866100	1.00[YRI][hapmap]
rs17866102	1.00[YRI][hapmap]
rs17866773	1.00[YRI][hapmap]
rs17867257	1.00[YRI][hapmap]
rs17867740	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17867741	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17869242	0.83[YRI][hapmap]
rs17869369	1.00[YRI][hapmap]
rs7778604	0.90[CEU][hapmap];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758132	chr7:126494789-126677843	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2759562	chr7:126494789-126677843	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv427805	chr7:126494789-126677843	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv831121	chr7:126593363-126774413	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
5	nsv608379	chr7:126643692-126657545	Enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv971543	chr7:126653280-126657192	Inactive region	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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