Variant report

Variant	rs10237471
Chromosome Location	chr6:147260764-147260765
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10226967	0.88[AFR][1000 genomes]
rs10229322	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10229785	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10231554	1.00[AMR][1000 genomes]
rs10231987	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10241394	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10242153	1.00[AMR][1000 genomes]
rs10242780	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10246079	1.00[AMR][1000 genomes]
rs10248531	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10255826	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10258598	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10280252	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28409613	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28414693	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28479746	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28609564	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28712322	1.00[AMR][1000 genomes]
rs57993664	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58204711	1.00[AMR][1000 genomes]
rs58678528	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60309391	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6950525	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6963014	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6970485	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830838	chr6:147090745-147274669	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
2	esv2760996	chr6:147229457-147269633	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	esv1846046	chr6:147258908-147271295	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147260600-147261200	Enhancers	Primary neutrophils fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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