Variant report

Variant	rs10410532
Chromosome Location	chr19:44734863-44734864
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10401758	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10405091	0.89[EUR][1000 genomes]
rs10406704	0.82[AFR][1000 genomes]
rs10406980	1.00[CEU][hapmap]
rs10409423	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10409643	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10409954	1.00[CEU][hapmap]
rs10411499	0.89[EUR][1000 genomes]
rs10415196	1.00[CEU][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10415563	1.00[CEU][hapmap]
rs10416493	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10418460	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs10422609	1.00[CEU][hapmap]
rs10424371	1.00[CEU][hapmap]
rs11881753	0.89[EUR][1000 genomes]
rs12104331	0.89[EUR][1000 genomes]
rs12104332	0.89[EUR][1000 genomes]
rs1584	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs16959114	1.00[CEU][hapmap]
rs16978665	1.00[CEU][hapmap]
rs16978910	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs16978912	0.89[EUR][1000 genomes]
rs16978921	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs2232803	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs28485815	0.89[EUR][1000 genomes]
rs28671410	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4803685	1.00[CEU][hapmap]
rs4803686	1.00[CEU][hapmap]
rs4803688	1.00[CEU][hapmap]
rs57176078	0.89[EUR][1000 genomes]
rs57706678	0.89[EUR][1000 genomes]
rs58216091	0.89[EUR][1000 genomes]
rs6509147	1.00[CEU][hapmap]
rs7250439	1.00[CEU][hapmap]
rs7253796	1.00[CEU][hapmap];0.89[EUR][1000 genomes]
rs7255445	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7257833	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs73553217	0.92[AFR][1000 genomes]
rs73567997	1.00[EUR][1000 genomes]
rs73934602	0.89[EUR][1000 genomes]
rs73937513	0.89[EUR][1000 genomes]
rs8111388	1.00[CEU][hapmap]
rs922063	1.00[CEU][hapmap]
rs9749373	1.00[EUR][1000 genomes]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44717400-44739000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr19:44717600-44739600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr19:44718200-44738800	Weak transcription	Hela-S3	cervix
4	chr19:44718400-44736400	Weak transcription	HUVEC	blood vessel
5	chr19:44723600-44738000	Weak transcription	NHEK	skin
6	chr19:44723800-44735800	Weak transcription	NH-A	brain
7	chr19:44729800-44735000	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
8	chr19:44729800-44735800	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
9	chr19:44729800-44741000	ZNF genes & repeats	Lung	lung
10	chr19:44729800-44768600	ZNF genes & repeats	Adipose Nuclei	Adipose
11	chr19:44730000-44735000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr19:44730000-44737000	ZNF genes & repeats	Fetal Muscle Leg	muscle
13	chr19:44730000-44741200	ZNF genes & repeats	Ovary	ovary
14	chr19:44730000-44741400	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
15	chr19:44730000-44742000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
16	chr19:44730000-44743600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr19:44730000-44745000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr19:44730000-44775600	ZNF genes & repeats	Liver	Liver
19	chr19:44730200-44736400	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr19:44730200-44736400	ZNF genes & repeats	Fetal Brain Female	brain
21	chr19:44730200-44739600	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr19:44730200-44741200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr19:44730200-44741200	ZNF genes & repeats	Aorta	Aorta
24	chr19:44730200-44743000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
25	chr19:44730200-44743400	ZNF genes & repeats	Fetal Lung	lung
26	chr19:44730200-44754600	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
27	chr19:44730400-44735200	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
28	chr19:44730400-44743400	Strong transcription	Cortex derived primary cultured neurospheres	brain
29	chr19:44730800-44739800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr19:44730800-44741000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr19:44731000-44739400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr19:44731000-44740800	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
33	chr19:44731000-44742000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr19:44731000-44744400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
35	chr19:44731200-44739800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr19:44731200-44741400	ZNF genes & repeats	Primary neutrophils fromperipheralblood	blood
37	chr19:44731400-44736000	Strong transcription	Primary B cells from peripheral blood	blood
38	chr19:44731400-44737600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
39	chr19:44731400-44738000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr19:44731400-44739800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr19:44731400-44741400	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
42	chr19:44731400-44742000	ZNF genes & repeats	Fetal Intestine Small	intestine
43	chr19:44731600-44736600	Strong transcription	H1 Cell Line	embryonic stem cell
44	chr19:44731600-44737200	ZNF genes & repeats	Fetal Intestine Large	intestine
45	chr19:44731600-44739400	Strong transcription	HSMMtube	muscle
46	chr19:44731600-44739800	Strong transcription	HUES6 Cell Line	embryonic stem cell
47	chr19:44731600-44741000	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
48	chr19:44731600-44741000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
49	chr19:44731600-44741200	Strong transcription	Placenta Amnion	Placenta Amnion
50	chr19:44731600-44741200	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon

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